RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 IGHV3-16A0A0C4DH30 117 aa14.05□□□□□ -0.16
CPNE1-219ENST00000440240 FUSP35637 526 aaKnown RBP eCLIP14.05□□□□□ -0.161e-10■■□□□ 12.2
CPNE1-219ENST00000440240 IFITM3Q01628 133 aa14.05□□□□□ -0.16
CPNE1-219ENST00000440240 KCNS1Q96KK3 526 aa14.05□□□□□ -0.16
CPNE1-219ENST00000440240 RPH3ALQ9UNE2 315 aa14.05□□□□□ -0.16
CPNE1-219ENST00000440240 GOLT1AQ6ZVE7 132 aa14.04□□□□□ -0.16
CPNE1-219ENST00000440240 TREM1Q9NP99 234 aa14.04□□□□□ -0.16
CPNE1-219ENST00000440240 CRYGDP07320 174 aa14.03□□□□□ -0.16
CPNE1-219ENST00000440240 XGP55808 180 aa14.03□□□□□ -0.16
CPNE1-219ENST00000440240 SDF2L1Q9HCN8 221 aa14.03□□□□□ -0.16
CPNE1-219ENST00000440240 EIF3GO75821 320 aaKnown RBP eCLIP14.02□□□□□ -0.17
CPNE1-219ENST00000440240 TIRAPP58753 221 aa14.02□□□□□ -0.17
CPNE1-219ENST00000440240 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.17
CPNE1-219ENST00000440240 CIDEAO60543 219 aa14.01□□□□□ -0.17
CPNE1-219ENST00000440240 TYMSP04818 313 aa14.01□□□□□ -0.17
CPNE1-219ENST00000440240 DEFA1P59665 94 aa14.01□□□□□ -0.17
CPNE1-219ENST00000440240 DEFA3P59666 94 aa14.01□□□□□ -0.17
CPNE1-219ENST00000440240 NHLRC2Q8NBF2 726 aa14.01□□□□□ -0.17
CPNE1-219ENST00000440240 TVP23CQ96ET8 276 aa14.01□□□□□ -0.17
CPNE1-219ENST00000440240 WFDC1Q9HC57 220 aa14.01□□□□□ -0.17
CPNE1-219ENST00000440240 F6UZH7 168 aa14□□□□□ -0.17
CPNE1-219ENST00000440240 KRTAP10-1P60331 282 aa14□□□□□ -0.17
CPNE1-219ENST00000440240 OR10G9Q8NGN4 311 aa14□□□□□ -0.17
CPNE1-219ENST00000440240 OR10G7Q8NGN6 311 aa14□□□□□ -0.17
CPNE1-219ENST00000440240 ASB13Q8WXK3 278 aa14□□□□□ -0.17
CPNE1-219ENST00000440240 NDFIP1Q9BT67 221 aa14□□□□□ -0.17
CPNE1-219ENST00000440240 FAT1Q14517 4588 aa14□□□□□ -0.17
CPNE1-219ENST00000440240 TRAV8-1A0A0A6YYK1 113 aa13.99□□□□□ -0.17
CPNE1-219ENST00000440240 IGHV3-38A0A0C4DH36 116 aa13.99□□□□□ -0.17
CPNE1-219ENST00000440240 SERTM2A0A1B0GWG4 89 aa13.99□□□□□ -0.17
CPNE1-219ENST00000440240 PFN1P07737 140 aaKnown RBP13.99□□□□□ -0.17
CPNE1-219ENST00000440240 GATA1P15976 413 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-219ENST00000440240 PPT1P50897 306 aa13.99□□□□□ -0.17
CPNE1-219ENST00000440240 FRZBQ92765 325 aa13.99□□□□□ -0.17
CPNE1-219ENST00000440240 LOC100131303A0A0U1RQF7 123 aa13.98□□□□□ -0.17
CPNE1-219ENST00000440240 INAFM2P0DMQ5 153 aa13.98□□□□□ -0.17
CPNE1-219ENST00000440240 GCSHP23434 173 aa13.98□□□□□ -0.17
CPNE1-219ENST00000440240 RAB2AP61019 212 aa13.98□□□□□ -0.17
CPNE1-219ENST00000440240 ZNF876PQ49A33 203 aa13.98□□□□□ -0.17
CPNE1-219ENST00000440240 TRAV8-6A0A0B4J262 113 aa13.97□□□□□ -0.17
CPNE1-219ENST00000440240 FBLL1A6NHQ2 334 aaKnown RBP13.97□□□□□ -0.17
CPNE1-219ENST00000440240 K7EQM0 130 aa13.97□□□□□ -0.17
CPNE1-219ENST00000440240 PSCAO43653 123 aa13.97□□□□□ -0.17
CPNE1-219ENST00000440240 GNG5P63218 68 aa13.97□□□□□ -0.17
CPNE1-219ENST00000440240 PRADC1Q9BSG0 188 aa13.97□□□□□ -0.17
CPNE1-219ENST00000440240 HERC1Q15751 4861 aa13.97□□□□□ -0.17
CPNE1-219ENST00000440240 TAAR5O14804 337 aa13.96□□□□□ -0.17
CPNE1-219ENST00000440240 HMGB3O15347 200 aaKnown RBP13.96□□□□□ -0.17
CPNE1-219ENST00000440240 LINC01556Q5JQF7 62 aa13.96□□□□□ -0.17
CPNE1-219ENST00000440240 SLC25A29Q8N8R3 303 aa13.96□□□□□ -0.17
CPNE1-219ENST00000440240 DMBT1Q9UGM3 2413 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-219ENST00000440240 TRBV6-4A0A1B0GX49 114 aa13.95□□□□□ -0.18
CPNE1-219ENST00000440240 IBA57-AS1B1ANH7 110 aa13.95□□□□□ -0.18
CPNE1-219ENST00000440240 ARL14EPLP0DKL9 152 aa13.95□□□□□ -0.18
CPNE1-219ENST00000440240 C5orf17Q8NAS9 161 aa13.95□□□□□ -0.18
CPNE1-219ENST00000440240 A6NHS1 94 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 RS1O15537 224 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 TCRAP04437 139 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 STAG3L2P0CL84 134 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 STAG3L3P0CL85 134 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 CDC34P49427 236 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-219ENST00000440240 RHOHQ15669 191 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 Q5VSD8 79 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 CFAP126Q5VTH2 177 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 SGK494Q96LW2 274 aa13.94□□□□□ -0.18
CPNE1-219ENST00000440240 OR10J3Q5JRS4 329 aa13.93□□□□□ -0.18
CPNE1-219ENST00000440240 OR2G3Q8NGZ4 309 aa13.93□□□□□ -0.18
CPNE1-219ENST00000440240 NTN5Q8WTR8 489 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-219ENST00000440240 PTH2Q96A98 100 aa13.93□□□□□ -0.18
CPNE1-219ENST00000440240 IGLV5-52A0A0A0MRZ9 124 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 GCGP01275 180 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 MBP02144 154 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 ZNF80P51504 273 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-219ENST00000440240 ZFP69Q49AA0 526 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 SUN5Q8TC36 379 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 RAB24Q969Q5 203 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 C11orf21Q9P2W6 132 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 PSG8Q9UQ74 426 aa13.92□□□□□ -0.18
CPNE1-219ENST00000440240 LRCOL1A6NCL2 159 aa13.91□□□□□ -0.18
CPNE1-219ENST00000440240 GCHFRP30047 84 aa13.91□□□□□ -0.18
CPNE1-219ENST00000440240 SUMO1P63165 101 aaKnown RBP13.91□□□□□ -0.18
CPNE1-219ENST00000440240 SERF2P84101 59 aa13.91□□□□□ -0.18
CPNE1-219ENST00000440240 SMUG1Q53HV7 270 aa13.91□□□□□ -0.18
CPNE1-219ENST00000440240 LELP1Q5T871 98 aa13.91□□□□□ -0.18
CPNE1-219ENST00000440240 C9orf85Q96MD7 179 aa13.91□□□□□ -0.18
CPNE1-219ENST00000440240 PSMG3Q9BT73 122 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-219ENST00000440240 EPDR1Q9UM22 224 aa13.91□□□□□ -0.18
CPNE1-219ENST00000440240 IGHV3-73A0A0B4J1V6 119 aa13.9□□□□□ -0.18
CPNE1-219ENST00000440240 FAM229AH3BQW9 127 aa13.9□□□□□ -0.18
CPNE1-219ENST00000440240 MGST1P10620 155 aaKnown RBP13.9□□□□□ -0.18
CPNE1-219ENST00000440240 FLI1Q01543 452 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-219ENST00000440240 SAPCD1Q5SSQ6 148 aa13.9□□□□□ -0.18
CPNE1-219ENST00000440240 DPPA3Q6W0C5 159 aa13.9□□□□□ -0.18
CPNE1-219ENST00000440240 HSD17B11Q8NBQ5 300 aa13.9□□□□□ -0.18
CPNE1-219ENST00000440240 SH3BGRL3Q9H299 93 aa13.9□□□□□ -0.18
CPNE1-219ENST00000440240 TMEM167BQ9NRX6 74 aa13.9□□□□□ -0.18
CPNE1-219ENST00000440240 PRNTQ86SH4 94 aa13.89□□□□□ -0.19
CPNE1-219ENST00000440240 ATP6V0E2Q8NHE4 81 aa13.89□□□□□ -0.19
CPNE1-219ENST00000440240 TMEM70Q9BUB7 260 aa13.89□□□□□ -0.19
CPNE1-219ENST00000440240 GTSF1LQ9H1H1 148 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms