RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 LINC00612Q8N6U2 182 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 MDFICQ9P1T7 246 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 IGHV4-4A0A075B6R2 117 aa13.77□□□□□ -0.21
SEMA3B-206ENST00000439487 PFN1P07737 140 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-206ENST00000439487 ZNF415Q09FC8 603 aa13.77□□□□□ -0.21
SEMA3B-206ENST00000439487 TDRG1Q3Y452 100 aa13.77□□□□□ -0.21
SEMA3B-206ENST00000439487 Q6ZTI0 123 aa13.77□□□□□ -0.21
SEMA3B-206ENST00000439487 C11orf21Q9P2W6 132 aa13.77□□□□□ -0.21
SEMA3B-206ENST00000439487 APLNQ9ULZ1 77 aa13.77□□□□□ -0.21
SEMA3B-206ENST00000439487 HYDINQ4G0P3 5121 aa13.76□□□□□ -0.21
SEMA3B-206ENST00000439487 TRGV11A0A075B6L2 103 aa13.76□□□□□ -0.21
SEMA3B-206ENST00000439487 TRBV6-1A0A0K0K1D8 114 aa13.76□□□□□ -0.21
SEMA3B-206ENST00000439487 IFNA1P01562 189 aa13.76□□□□□ -0.21
SEMA3B-206ENST00000439487 BLOC1S1P78537 153 aa13.76□□□□□ -0.21
SEMA3B-206ENST00000439487 ZFP30Q9Y2G7 519 aa13.76□□□□□ -0.21
SEMA3B-206ENST00000439487 VPS13DQ5THJ4 4388 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 SPINK4O60575 86 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 TYMSP04818 313 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 ATP5G1P05496 136 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 ZC2HC1AQ96GY0 325 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 KCNS1Q96KK3 526 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
SEMA3B-206ENST00000439487 LTAP01374 205 aa13.74□□□□□ -0.21
SEMA3B-206ENST00000439487 S100A9P06702 114 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-206ENST00000439487 TXNDC17Q9BRA2 123 aa13.74□□□□□ -0.21
SEMA3B-206ENST00000439487 KRTAP17-1Q9BYP8 105 aa13.74□□□□□ -0.21
SEMA3B-206ENST00000439487 MRPL16Q9NX20 251 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-206ENST00000439487 IGHV3-16A0A0C4DH30 117 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 FABP5P3A8MUU1 101 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 F5H768 121 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 BCL2P10415 239 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 CRIP1P50238 77 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 TCTAP57738 103 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 COX8CQ7Z4L0 72 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 NHLRC2Q8NBF2 726 aa13.73□□□□□ -0.21
SEMA3B-206ENST00000439487 MEF2BQ02080 365 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-206ENST00000439487 TMEM88Q6PEY1 159 aa13.72□□□□□ -0.21
SEMA3B-206ENST00000439487 LINC00476Q8WZB0 136 aa13.72□□□□□ -0.21
SEMA3B-206ENST00000439487 C11orf52Q96A22 123 aa13.72□□□□□ -0.21
SEMA3B-206ENST00000439487 NDUFAF3Q9BU61 184 aa13.72□□□□□ -0.21
SEMA3B-206ENST00000439487 VAX2Q9UIW0 290 aa13.72□□□□□ -0.21
SEMA3B-206ENST00000439487 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 LY6G6CO95867 125 aa13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 RPL35P42766 123 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 BAGE2Q86Y30 109 aa13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 FAM210BQ96KR6 192 aa13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 SPXQ9BT56 116 aa13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
SEMA3B-206ENST00000439487 IGKV3D-20A0A0C4DH25 116 aa13.7□□□□□ -0.22
SEMA3B-206ENST00000439487 SH2D1AO60880 128 aa13.7□□□□□ -0.22
SEMA3B-206ENST00000439487 LGALS9BQ3B8N2 356 aa13.7□□□□□ -0.22
SEMA3B-206ENST00000439487 PDE6DO43924 150 aa13.69□□□□□ -0.22
SEMA3B-206ENST00000439487 ORM1P02763 201 aa13.69□□□□□ -0.22
SEMA3B-206ENST00000439487 TAGLN2P37802 199 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-206ENST00000439487 ZNF674Q2M3X9 581 aa13.69□□□□□ -0.22
SEMA3B-206ENST00000439487 FAM162BQ5T6X4 162 aa13.69□□□□□ -0.22
SEMA3B-206ENST00000439487 MED9Q9NWA0 146 aa13.69□□□□□ -0.22
SEMA3B-206ENST00000439487 HOXA5P20719 270 aa13.68□□□□□ -0.22
SEMA3B-206ENST00000439487 OR5I1Q13606 314 aa13.68□□□□□ -0.22
SEMA3B-206ENST00000439487 C18orf15Q96N68 181 aa13.68□□□□□ -0.22
SEMA3B-206ENST00000439487 MLST8Q9BVC4 326 aa13.68□□□□□ -0.22
SEMA3B-206ENST00000439487 RAB19A4D1S5 217 aa13.67□□□□□ -0.22
SEMA3B-206ENST00000439487 RBFOX3A6NFN3 312 aa13.67□□□□□ -0.22
SEMA3B-206ENST00000439487 B4DEV8 164 aa13.67□□□□□ -0.22
SEMA3B-206ENST00000439487 M0R036 132 aa13.67□□□□□ -0.22
SEMA3B-206ENST00000439487 M0R2P5 195 aa13.67□□□□□ -0.22
SEMA3B-206ENST00000439487 IGHV3-53P01767 116 aa13.67□□□□□ -0.22
SEMA3B-206ENST00000439487 TEX261Q6UWH6 196 aa13.67□□□□□ -0.22
SEMA3B-206ENST00000439487 CENPWQ5EE01 88 aa13.66□□□□□ -0.22
SEMA3B-206ENST00000439487 LGALS9CQ6DKI2 356 aa13.66□□□□□ -0.22
SEMA3B-206ENST00000439487 PCNPQ8WW12 178 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-206ENST00000439487 RASL10AQ92737 203 aa13.66□□□□□ -0.22
SEMA3B-206ENST00000439487 KRBOX1C9JBD0 128 aa13.65□□□□□ -0.22
SEMA3B-206ENST00000439487 RNASE3P12724 160 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-206ENST00000439487 C9orf85Q96MD7 179 aa13.65□□□□□ -0.22
SEMA3B-206ENST00000439487 DNAH6Q9C0G6 4158 aa13.65□□□□□ -0.22
SEMA3B-206ENST00000439487 TRAV26-1A0A087WT03 109 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 TMSB15BA0A087X1C1 80 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 A0A0J9YY99 117 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 GRIFINA4D1Z8 144 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 S100A4P26447 101 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 ASIPP42127 132 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 KMT2AQ03164 3969 aa13.64□□□□□ -0.23
SEMA3B-206ENST00000439487 C9JCJ5 164 aa13.63□□□□□ -0.23
SEMA3B-206ENST00000439487 IGLV2-8P01709 118 aa13.63□□□□□ -0.23
SEMA3B-206ENST00000439487 LINC01559Q495D7 138 aa13.63□□□□□ -0.23
SEMA3B-206ENST00000439487 TOR2AQ5JU69 321 aa13.63□□□□□ -0.23
SEMA3B-206ENST00000439487 ZNF575Q86XF7 245 aa13.63□□□□□ -0.23
SEMA3B-206ENST00000439487 C15orf53Q8NAA6 179 aa13.63□□□□□ -0.23
SEMA3B-206ENST00000439487 PGPEP1LA6NFU8 196 aa13.62□□□□□ -0.23
SEMA3B-206ENST00000439487 NUDT3O95989 172 aa13.62□□□□□ -0.23
SEMA3B-206ENST00000439487 SFTA3P0C7M3 94 aa13.62□□□□□ -0.23
SEMA3B-206ENST00000439487 GNG4P50150 75 aa13.62□□□□□ -0.23
SEMA3B-206ENST00000439487 POM121L12Q8N7R1 296 aa13.62□□□□□ -0.23
SEMA3B-206ENST00000439487 ZNF479Q96JC4 524 aa13.62□□□□□ -0.23
SEMA3B-206ENST00000439487 TRBV20OR9-2A0A075B6H5 130 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms