RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TMEM158Q8WZ71 300 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 TMEM160Q9NX00 188 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 CREBBPQ92793 2442 aa6.65□□□□□ -1.35
HPS4-206ENST00000439453 ABCA2Q9BZC7 2435 aa6.65□□□□□ -1.35
HPS4-206ENST00000439453 FLNAP21333 2647 aaKnown RBP6.65□□□□□ -1.35
HPS4-206ENST00000439453 TNFRSF6BO95407 300 aa6.65□□□□□ -1.35
HPS4-206ENST00000439453 RRN3P1Q2M238 152 aa6.65□□□□□ -1.35
HPS4-206ENST00000439453 MRAP2Q96G30 205 aa6.65□□□□□ -1.35
HPS4-206ENST00000439453 CCL19Q99731 98 aa6.65□□□□□ -1.35
HPS4-206ENST00000439453 TRAV40A0A0B4J280 105 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 K7EIM0 57 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 CNIH1O95406 144 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 PDE6HQ13956 83 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 SFTA2Q6UW10 78 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 COX8CQ7Z4L0 72 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 TTC9CQ8N5M4 171 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 PRR25Q96S07 402 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 FBXL15Q9H469 300 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 BEX4Q9NWD9 120 aaPredicted RBP6.64□□□□□ -1.35
HPS4-206ENST00000439453 CCDC168Q8NDH2 2452 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 TRAV26-1A0A087WT03 109 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 IGHV1-8P0DP01 117 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 ZNF80P51504 273 aaPredicted RBP6.64□□□□□ -1.35
HPS4-206ENST00000439453 Q1RN00 199 aa6.64□□□□□ -1.35
HPS4-206ENST00000439453 MRPL35Q9NZE8 188 aaKnown RBP6.64□□□□□ -1.35
HPS4-206ENST00000439453 IGHV4-39P01824 125 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 GATA1P15976 413 aaPredicted RBP6.63□□□□□ -1.35
HPS4-206ENST00000439453 TMEM155Q4W5P6 130 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 ZNF575Q86XF7 245 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 LRRC75A-AS1Q8N1F1 130 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 A0A096LNT2 108 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 Q8TAT8 98 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 ZNF418Q8TF45 676 aaPredicted RBP6.63□□□□□ -1.35
HPS4-206ENST00000439453 CTSZQ9UBR2 303 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 MED13LQ71F56 2210 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 TMEM178BH3BS89 294 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 CRYBA4P53673 196 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 Q8N8P6 123 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 C20orf78Q9BR46 151 aa6.63□□□□□ -1.35
HPS4-206ENST00000439453 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
HPS4-206ENST00000439453 IGHV1-3A0A0C4DH29 117 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 C17orf100A8MU93 164 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 ORM1P02763 201 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 WFDC11Q8NEX6 87 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 TRBV7-3A0A075B6L6 115 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 NCBP2LA6PVI3 153 aaKnown RBP6.62□□□□□ -1.35
HPS4-206ENST00000439453 TNFRSF13BO14836 293 aaPredicted RBP6.62□□□□□ -1.35
HPS4-206ENST00000439453 APOMO95445 188 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 DLX1P56177 255 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 PRB3Q04118 309 aaPredicted RBP6.62□□□□□ -1.35
HPS4-206ENST00000439453 CCL17Q92583 94 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 CNFNQ9BYD5 112 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
HPS4-206ENST00000439453 PSMB2P49721 201 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
HPS4-206ENST00000439453 IGLV2-18A0A075B6J9 118 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 PPIFP30405 207 aaKnown RBP6.61□□□□□ -1.35
HPS4-206ENST00000439453 S4R3C0 116 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 LY6HO94772 140 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 RPL7P18124 248 aaKnown RBP6.61□□□□□ -1.35
HPS4-206ENST00000439453 SRSF2Q01130 221 aaKnown RBP6.61□□□□□ -1.35
HPS4-206ENST00000439453 FOXI1Q12951 378 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 C8orf86Q6ZUL3 223 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 A0A087WX48 190 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 RPEQ96AT9 228 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 SRSF8Q9BRL6 282 aaKnown RBP6.61□□□□□ -1.35
HPS4-206ENST00000439453 C1QTNF4Q9BXJ3 329 aa6.61□□□□□ -1.35
HPS4-206ENST00000439453 NDUFA3O95167 84 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 SYT8Q8NBV8 401 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 CDIP1Q9H305 208 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 B9A039 149 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 MORN3Q6PF18 240 aaPredicted RBP6.6□□□□□ -1.35
HPS4-206ENST00000439453 RAB1BQ9H0U4 201 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 CYSLTR1Q9Y271 337 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 FABP5P3A8MUU1 101 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 LINC01619G3V211 115 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 BUB1B-PAK6H3BSN5 160 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 TGFAP01135 160 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 IGLV1-47P01700 117 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 LAGE3Q14657 143 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 IGFL4Q6B9Z1 124 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
HPS4-206ENST00000439453 HOXA3O43365 443 aaPredicted RBP6.59□□□□□ -1.35
HPS4-206ENST00000439453 CLEC3BP05452 202 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 SPINK8P0C7L1 97 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 PLNP26678 52 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 KLRD1Q13241 179 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 HLA-DMBP28068 263 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 SMCPP49901 116 aaPredicted RBP6.59□□□□□ -1.35
HPS4-206ENST00000439453 KRTAP1-1Q07627 177 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 CFAP126Q5VTH2 177 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 ZNF48Q96MX3 618 aaPredicted RBP6.59□□□□□ -1.35
HPS4-206ENST00000439453 NF1P21359 2839 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 MYMXA0A1B0GTQ4 84 aa6.59□□□□□ -1.35
HPS4-206ENST00000439453 A6NJY4 79 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms