RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MYMXA0A1B0GTQ4 84 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 Q6ZUT4 128 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 C1QTNF4Q9BXJ3 329 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 PRO3102Q9H379 93 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 THBDP07204 575 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 PRTN3P24158 256 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 MFAP4P55083 255 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 CARD19Q96LW7 228 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 IGKV3-7A0A075B6H7 116 aa10.3□□□□□ -0.76
ACTN1-204ENST00000438964 CFAP126Q5VTH2 177 aa10.3□□□□□ -0.76
ACTN1-204ENST00000438964 NRACQ8N912 160 aa10.3□□□□□ -0.76
ACTN1-204ENST00000438964 TSPAN13O95857 204 aa10.3□□□□□ -0.76
ACTN1-204ENST00000438964 MGPP08493 103 aa10.3□□□□□ -0.76
ACTN1-204ENST00000438964 RPL7P18124 248 aaKnown RBP10.3□□□□□ -0.76
ACTN1-204ENST00000438964 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
ACTN1-204ENST00000438964 SVIPQ8NHG7 77 aa10.3□□□□□ -0.76
ACTN1-204ENST00000438964 NBR2O15453 112 aa10.29□□□□□ -0.76
ACTN1-204ENST00000438964 AGPAT4-IT1Q9H0P7 198 aa10.29□□□□□ -0.76
ACTN1-204ENST00000438964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.29□□□□□ -0.765e-7■■■□□ 17.7
ACTN1-204ENST00000438964 TRBV20-1A0A075B6N2 111 aa10.29□□□□□ -0.76
ACTN1-204ENST00000438964 C14orf178Q8N769 122 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-204ENST00000438964 DEFB124Q8NES8 71 aa10.29□□□□□ -0.76
ACTN1-204ENST00000438964 RAX2Q96IS3 184 aa10.29□□□□□ -0.76
ACTN1-204ENST00000438964 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 B5MCH6 92 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 CTSGP08311 255 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 ECSCRQ19T08 205 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 Q9UFV3 132 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 TNFRSF13BO14836 293 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-204ENST00000438964 ARL3P36405 182 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 PDE6HQ13956 83 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 Q6ZS46 218 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 DLX4Q92988 240 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-204ENST00000438964 IGHV3-64A0A075B6Q5 118 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 E7EQL1 145 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 F8VRH5 84 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 TCL1BO95988 128 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
ACTN1-204ENST00000438964 TCTEX1D4Q5JR98 221 aa10.27□□□□□ -0.77
ACTN1-204ENST00000438964 PRR9Q5T870 116 aa10.27□□□□□ -0.77
ACTN1-204ENST00000438964 PIFOQ8TCI5 191 aa10.27□□□□□ -0.77
ACTN1-204ENST00000438964 H7C1H1 209 aa10.27□□□□□ -0.77
ACTN1-204ENST00000438964 CRIP2P52943 208 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-204ENST00000438964 ANAPC13Q9BS18 74 aa10.27□□□□□ -0.77
ACTN1-204ENST00000438964 NOTCH3Q9UM47 2321 aa10.26□□□□□ -0.77
ACTN1-204ENST00000438964 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
ACTN1-204ENST00000438964 CLEC3BP05452 202 aa10.26□□□□□ -0.77
ACTN1-204ENST00000438964 NUP37Q8NFH4 326 aa10.26□□□□□ -0.77
ACTN1-204ENST00000438964 ZNF292O60281 2723 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 IGLV11-55A0A075B6I3 123 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 IGHV7-4-1A0A0J9YVY3 117 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 PLNP26678 52 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 TRPT1Q86TN4 253 aaKnown RBP10.25□□□□□ -0.77
ACTN1-204ENST00000438964 RASL10AQ92737 203 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 BEX4Q9NWD9 120 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-204ENST00000438964 LINC00527Q9UJ94 153 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 MSRB2Q9Y3D2 182 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 PSMG3-AS1Q96PY0 264 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 SHISA9B4DS77 424 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
ACTN1-204ENST00000438964 ANKRD29Q8N6D5 301 aa10.25□□□□□ -0.77
ACTN1-204ENST00000438964 SPG11Q96JI7 2443 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 C8orf31Q8N9H6 132 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 ZNF48Q96MX3 618 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-204ENST00000438964 SMIM2Q9BVW6 85 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 RAB1BQ9H0U4 201 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 ZNF883P0CG24 379 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 C5orf64Q2M2E5 130 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 C15orf32Q32M92 178 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 C2orf66Q6UXQ4 117 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 CLEC19AQ6UXS0 136 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 ASCL5Q7RTU5 278 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 BAALCQ8WXS3 180 aa10.24□□□□□ -0.77
ACTN1-204ENST00000438964 VSTM5A8MXK1 200 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 RPL39P62891 51 aaKnown RBP10.23□□□□□ -0.77
ACTN1-204ENST00000438964 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 IGFL2Q6UWQ7 119 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 DOPEY2Q9Y3R5 2298 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 AJUBAQ96IF1 538 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 G3V318 75 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
ACTN1-204ENST00000438964 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 LINC01560Q8TB33 94 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
ACTN1-204ENST00000438964 TSPEAR-AS2P59090 65 aa10.22□□□□□ -0.77
ACTN1-204ENST00000438964 TAL2Q16559 108 aa10.22□□□□□ -0.77
ACTN1-204ENST00000438964 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
ACTN1-204ENST00000438964 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
ACTN1-204ENST00000438964 F6UB75 175 aa10.22□□□□□ -0.77
ACTN1-204ENST00000438964 CRLF1O75462 422 aa10.22□□□□□ -0.77
ACTN1-204ENST00000438964 JPT2Q9H910 190 aa10.22□□□□□ -0.77
ACTN1-204ENST00000438964 LINC01546A6NGU7 62 aa10.21□□□□□ -0.77
ACTN1-204ENST00000438964 C9JAW5 83 aa10.21□□□□□ -0.77
ACTN1-204ENST00000438964 SUMO2P61956 95 aaKnown RBP10.21□□□□□ -0.77
ACTN1-204ENST00000438964 NEXN-AS1Q8NBZ9 246 aa10.21□□□□□ -0.77
ACTN1-204ENST00000438964 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-204ENST00000438964 DPM3Q9P2X0 92 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms