RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 Q5VSD8 79 aa12.24□□□□□ -0.45
GTF3A-204ENST00000438571 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
GTF3A-204ENST00000438571 HMGB3O15347 200 aaKnown RBP12.23□□□□□ -0.45
GTF3A-204ENST00000438571 ORM1P02763 201 aa12.23□□□□□ -0.45
GTF3A-204ENST00000438571 RPL12P30050 165 aaKnown RBP12.23□□□□□ -0.45
GTF3A-204ENST00000438571 RAB2AP61019 212 aa12.23□□□□□ -0.45
GTF3A-204ENST00000438571 CYCSP99999 105 aaKnown RBP12.23□□□□□ -0.45
GTF3A-204ENST00000438571 OR4C5Q8NGB2 326 aa12.23□□□□□ -0.45
GTF3A-204ENST00000438571 TMED6Q8WW62 240 aa12.23□□□□□ -0.45
GTF3A-204ENST00000438571 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
GTF3A-204ENST00000438571 MBD2Q9UBB5 411 aa12.23□□□□□ -0.45
GTF3A-204ENST00000438571 TRAV9-2A0A087WT02 112 aa12.22□□□□□ -0.45
GTF3A-204ENST00000438571 CRYGDP07320 174 aa12.22□□□□□ -0.45
GTF3A-204ENST00000438571 EVI2AP22794 236 aa12.22□□□□□ -0.45
GTF3A-204ENST00000438571 TAS2R45P59539 299 aa12.22□□□□□ -0.45
GTF3A-204ENST00000438571 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.45
GTF3A-204ENST00000438571 C9JCJ5 164 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 M0R2P5 195 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 IFNA5P01569 189 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 INAFM2P0DMQ5 153 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 CMTM2Q8TAZ6 248 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 TXNDC17Q9BRA2 123 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 MARVELD1Q9BSK0 173 aa12.21□□□□□ -0.45
GTF3A-204ENST00000438571 TRAV21A0A0B4J279 112 aa12.2□□□□□ -0.46
GTF3A-204ENST00000438571 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
GTF3A-204ENST00000438571 GATA1P15976 413 aaPredicted RBP12.2□□□□□ -0.46
GTF3A-204ENST00000438571 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
GTF3A-204ENST00000438571 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
GTF3A-204ENST00000438571 TREM1Q9NP99 234 aa12.2□□□□□ -0.46
GTF3A-204ENST00000438571 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
GTF3A-204ENST00000438571 SSNA1O43805 119 aa12.19□□□□□ -0.46
GTF3A-204ENST00000438571 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
GTF3A-204ENST00000438571 NHLRC2Q8NBF2 726 aa12.19□□□□□ -0.46
GTF3A-204ENST00000438571 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
GTF3A-204ENST00000438571 LRCOL1A6NCL2 159 aa12.18□□□□□ -0.46
GTF3A-204ENST00000438571 ACOT6Q3I5F7 207 aaPredicted RBP12.18□□□□□ -0.46
GTF3A-204ENST00000438571 PQLC2Q6ZP29 291 aa12.18□□□□□ -0.46
GTF3A-204ENST00000438571 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
GTF3A-204ENST00000438571 PET100P0DJ07 73 aa12.17□□□□□ -0.46
GTF3A-204ENST00000438571 ARL14EPLP0DKL9 152 aa12.17□□□□□ -0.46
GTF3A-204ENST00000438571 GCSHP23434 173 aa12.17□□□□□ -0.46
GTF3A-204ENST00000438571 PPT1P50897 306 aa12.17□□□□□ -0.46
GTF3A-204ENST00000438571 FAM74A1Q5RGS3 127 aa12.17□□□□□ -0.46
GTF3A-204ENST00000438571 FRZBQ92765 325 aa12.17□□□□□ -0.46
GTF3A-204ENST00000438571 DMBT1Q9UGM3 2413 aaPredicted RBP12.16□□□□□ -0.46
GTF3A-204ENST00000438571 IGHV3-38A0A0C4DH36 116 aa12.16□□□□□ -0.46
GTF3A-204ENST00000438571 A0A1W2PPV4 95 aa12.16□□□□□ -0.46
GTF3A-204ENST00000438571 K7EP13 123 aa12.16□□□□□ -0.46
GTF3A-204ENST00000438571 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
GTF3A-204ENST00000438571 SLC25A29Q8N8R3 303 aa12.16□□□□□ -0.46
GTF3A-204ENST00000438571 ASB13Q8WXK3 278 aa12.16□□□□□ -0.46
GTF3A-204ENST00000438571 Q9HAA7 133 aa12.16□□□□□ -0.46
GTF3A-204ENST00000438571 FBLL1A6NHQ2 334 aaKnown RBP12.15□□□□□ -0.46
GTF3A-204ENST00000438571 DEFA1P59665 94 aa12.15□□□□□ -0.46
GTF3A-204ENST00000438571 DEFA3P59666 94 aa12.15□□□□□ -0.46
GTF3A-204ENST00000438571 LINC01556Q5JQF7 62 aa12.15□□□□□ -0.46
GTF3A-204ENST00000438571 CFAP126Q5VTH2 177 aa12.15□□□□□ -0.46
GTF3A-204ENST00000438571 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
GTF3A-204ENST00000438571 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
GTF3A-204ENST00000438571 RS1O15537 224 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 CDC34P49427 236 aaPredicted RBP12.14□□□□□ -0.47
GTF3A-204ENST00000438571 TIRAPP58753 221 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 ZNF876PQ49A33 203 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 Q8N3U1 123 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 KCNS1Q96KK3 526 aa12.14□□□□□ -0.47
GTF3A-204ENST00000438571 IGLV5-52A0A0A0MRZ9 124 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 IBA57-AS1B1ANH7 110 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 PSCAO43653 123 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 GCGP01275 180 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 TCRAP04437 139 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 STAG3L2P0CL84 134 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 STAG3L3P0CL85 134 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 ARL6IP6Q8N6S5 226 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 C9orf85Q96MD7 179 aa12.13□□□□□ -0.47
GTF3A-204ENST00000438571 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
GTF3A-204ENST00000438571 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
GTF3A-204ENST00000438571 WFDC2Q14508 124 aa12.12□□□□□ -0.47
GTF3A-204ENST00000438571 OR10J3Q5JRS4 329 aa12.12□□□□□ -0.47
GTF3A-204ENST00000438571 ZNF506Q5JVG8 444 aa12.12□□□□□ -0.47
GTF3A-204ENST00000438571 FAM30AQ9NZY2 134 aa12.12□□□□□ -0.47
GTF3A-204ENST00000438571 PSG8Q9UQ74 426 aa12.12□□□□□ -0.47
GTF3A-204ENST00000438571 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
GTF3A-204ENST00000438571 GCHFRP30047 84 aa12.11□□□□□ -0.47
GTF3A-204ENST00000438571 RHOHQ15669 191 aa12.11□□□□□ -0.47
GTF3A-204ENST00000438571 RGS21Q2M5E4 152 aa12.11□□□□□ -0.47
GTF3A-204ENST00000438571 SH2D6Q7Z4S9 175 aa12.11□□□□□ -0.47
GTF3A-204ENST00000438571 Q8N814 137 aa12.11□□□□□ -0.47
GTF3A-204ENST00000438571 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
GTF3A-204ENST00000438571 Q6ZSN1 163 aa12.1□□□□□ -0.47
GTF3A-204ENST00000438571 PRNTQ86SH4 94 aa12.1□□□□□ -0.47
GTF3A-204ENST00000438571 C5orf17Q8NAS9 161 aa12.1□□□□□ -0.47
GTF3A-204ENST00000438571 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
GTF3A-204ENST00000438571 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms