RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 ATP5EP2Q5VTU8 51 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 RUSC1-AS1Q66K80 236 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 MIR17HGQ75NE6 70 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 COL4A1P02462 1669 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 TRBV6-6A0A0A6YYG2 114 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 IGLV3-1P01715 115 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 IGLV3-27P01718 113 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 COX6B1P14854 86 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 PLGLAQ15195 96 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 Q1RN00 199 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 C16orf47Q6ZP98 133 aaPredicted RBP4.92□□□□□ -1.62
MCF2-205ENST00000437564 PHF5AQ7RTV0 110 aaKnown RBP4.92□□□□□ -1.62
MCF2-205ENST00000437564 ZNF329Q86UD4 541 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 WFDC5Q8TCV5 224 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 SPTSSAQ969W0 71 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 LYZL4Q96KX0 146 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 EML6Q6ZMW3 1958 aa4.92□□□□□ -1.62
MCF2-205ENST00000437564 TCF20Q9UGU0 1960 aaKnown RBP4.92□□□□□ -1.62
MCF2-205ENST00000437564 MPDZO75970 2070 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 HEATR5BQ9P2D3 2071 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 TRAV7A0A075B6U4 112 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 TRBV6-1A0A0K0K1D8 114 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 TMEM30CPA0ZSE6 113 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 Q6ZVQ6 151 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 DYNAPQ8N1N2 210 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 C20orf197Q8N268 126 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 FGFBP3Q8TAT2 258 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 Q9H8V8 135 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 UBE2D4Q9Y2X8 147 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 SHANK1Q9Y566 2161 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 SPTBP11277 2137 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 IGHV1OR15-9A0A0B4J2B8 117 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 J3QT63 122 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 WNT9BO14905 357 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 UBALD1Q8TB05 177 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 CXXC4Q9H2H0 198 aa4.91□□□□□ -1.62
MCF2-205ENST00000437564 VCYO14598 125 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 SPINT3P49223 89 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 UBE2BP63146 152 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 S100A7L2Q5SY68 101 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 FAM222AQ5U5X8 452 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 THAP8Q8NA92 274 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 LINC00588Q9Y4M8 146 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 TET1Q8NFU7 2136 aa4.9□□□□□ -1.63
MCF2-205ENST00000437564 CACNA1CQ13936 2221 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 TRBV10-3A0A0K0K1G6 114 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 OVOL3O00110 214 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 TRIAP1O43715 76 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
MCF2-205ENST00000437564 NDUFA3O95167 84 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 ARMS2P0C7Q2 107 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 Q1T7F1 81 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 Q6ZPA2 131 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 FOXL2NBQ6ZUU3 175 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.89□□□□□ -1.63
MCF2-205ENST00000437564 ITLN1Q8WWA0 313 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 ZNF524Q96C55 264 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 ICOSQ9Y6W8 199 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 COL5A1P20908 1838 aaPredicted RBP4.89□□□□□ -1.63
MCF2-205ENST00000437564 MYOFQ9NZM1 2061 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 ADM5C9JUS6 153 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 TMEM256-PLSCR3K7ERE1 68 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 CIRBPQ14011 172 aaKnown RBP4.89□□□□□ -1.63
MCF2-205ENST00000437564 MLANAQ16655 118 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 ESRGQ1W209 222 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 MRPL51Q4U2R6 128 aaKnown RBP4.89□□□□□ -1.63
MCF2-205ENST00000437564 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.89□□□□□ -1.63
MCF2-205ENST00000437564 ZNF826PQ6ZT77 177 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 DYNLRB2Q8TF09 96 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 TSACCQ96A04 125 aaPredicted RBP4.89□□□□□ -1.63
MCF2-205ENST00000437564 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
MCF2-205ENST00000437564 POLEQ07864 2286 aa4.88□□□□□ -1.63
MCF2-205ENST00000437564 IGLV3-32A0A0A0MS00 114 aa4.88□□□□□ -1.63
MCF2-205ENST00000437564 PSPNO60542 156 aa4.88□□□□□ -1.63
MCF2-205ENST00000437564 LCA10Q71F78 164 aa4.88□□□□□ -1.63
MCF2-205ENST00000437564 C6orf106Q9H6K1 298 aaPredicted RBP4.88□□□□□ -1.63
MCF2-205ENST00000437564 COL4A2P08572 1712 aa4.88□□□□□ -1.63
MCF2-205ENST00000437564 C2orf16Q68DN1 1984 aa4.88□□□□□ -1.63
MCF2-205ENST00000437564 TMEM202A6NGA9 273 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 DDTLA6NHG4 134 aaPredicted RBP4.87□□□□□ -1.63
MCF2-205ENST00000437564 COX7A2P2O60397 106 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 IGHV3-13P01766 116 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 PRSS2P07478 247 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 CTSZQ9UBR2 303 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 TRGV8A0A0C4DH27 118 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 IGKV1-6A0A0C4DH72 117 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 PIGYQ3MUY2 71 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 ZNF876PQ49A33 203 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 FAM216BQ8N7L0 139 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 MPLKIPQ8TAP9 179 aa4.87□□□□□ -1.63
MCF2-205ENST00000437564 CXorf51AA0A1B0GTR3 108 aa4.86□□□□□ -1.63
MCF2-205ENST00000437564 CCL24O00175 119 aa4.86□□□□□ -1.63
MCF2-205ENST00000437564 IGLV2-14P01704 120 aa4.86□□□□□ -1.63
MCF2-205ENST00000437564 LINC00271P0C7V0 271 aa4.86□□□□□ -1.63
MCF2-205ENST00000437564 FXYD7P58549 80 aa4.86□□□□□ -1.63
MCF2-205ENST00000437564 BLCAPP62952 87 aa4.86□□□□□ -1.63
MCF2-205ENST00000437564 LAGE3Q14657 143 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms