RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 ZNF688P0C7X2 276 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 OR10J6PQ8NGY7 276 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 URB1-AS1Q96HZ7 61 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 TPPP3Q9BW30 176 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 FAM231BA6NCW3 169 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 J3KRW8 73 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 OVOL1O14753 267 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 OR8A1Q8NGG7 326 aa15.86■□□□□ 0.13
PTPRF-207ENST00000436724 ZNF575Q86XF7 245 aa15.85■□□□□ 0.13
PTPRF-207ENST00000436724 BORCS7Q96B45 105 aa15.85■□□□□ 0.13
PTPRF-207ENST00000436724 FABP5P3A8MUU1 101 aa15.85■□□□□ 0.13
PTPRF-207ENST00000436724 HSBP1O75506 76 aa15.85■□□□□ 0.13
PTPRF-207ENST00000436724 FOXA3P55318 350 aaPredicted RBP15.85■□□□□ 0.13
PTPRF-207ENST00000436724 PRR9Q5T870 116 aa15.85■□□□□ 0.13
PTPRF-207ENST00000436724 JMJD8Q96S16 334 aa15.85■□□□□ 0.13
PTPRF-207ENST00000436724 M0QZ24 198 aa15.84■□□□□ 0.13
PTPRF-207ENST00000436724 ORM1P02763 201 aa15.84■□□□□ 0.13
PTPRF-207ENST00000436724 ID1P41134 155 aa15.84■□□□□ 0.13
PTPRF-207ENST00000436724 K7EQG2 157 aa15.83■□□□□ 0.13
PTPRF-207ENST00000436724 PSMG4Q5JS54 123 aa15.83■□□□□ 0.13
PTPRF-207ENST00000436724 RNASEKQ6P5S7 137 aaKnown RBP15.83■□□□□ 0.13
PTPRF-207ENST00000436724 PPP1R14DQ9NXH3 145 aa15.83■□□□□ 0.13
PTPRF-207ENST00000436724 C11orf21Q9P2W6 132 aa15.83■□□□□ 0.13
PTPRF-207ENST00000436724 ARMS2P0C7Q2 107 aa15.83■□□□□ 0.12
PTPRF-207ENST00000436724 EBLN2Q6P2I7 272 aa15.83■□□□□ 0.12
PTPRF-207ENST00000436724 LINC00477Q96M19 166 aa15.83■□□□□ 0.12
PTPRF-207ENST00000436724 PEMTQ9UBM1 199 aa15.83■□□□□ 0.12
PTPRF-207ENST00000436724 C2CD3Q4AC94 2353 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 M0R2Z0 102 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 NDUFA7O95182 113 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 SPATA45Q537H7 98 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 WFDC12Q8WWY7 111 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 TSSC4Q9Y5U2 329 aaPredicted RBP15.82■□□□□ 0.12
PTPRF-207ENST00000436724 CCL24O00175 119 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 CSN3P07498 182 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 FOSL1P15407 271 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 PROK1P58294 105 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 KIR3DS1Q14943 382 aa15.82■□□□□ 0.12
PTPRF-207ENST00000436724 MRPL52Q86TS9 123 aaKnown RBP15.82■□□□□ 0.12
PTPRF-207ENST00000436724 MUC21A0A0G2JKD1 596 aa15.81■□□□□ 0.12
PTPRF-207ENST00000436724 MUC21A0A140T8X8 626 aa15.81■□□□□ 0.12
PTPRF-207ENST00000436724 TCAPO15273 167 aa15.81■□□□□ 0.12
PTPRF-207ENST00000436724 FHL3Q13643 280 aa15.81■□□□□ 0.12
PTPRF-207ENST00000436724 MUC21Q5SSG8 566 aa15.81■□□□□ 0.12
PTPRF-207ENST00000436724 ZFAND2AQ8N6M9 145 aa15.81■□□□□ 0.12
PTPRF-207ENST00000436724 IGKV3D-20A0A0C4DH25 116 aa15.8■□□□□ 0.12
PTPRF-207ENST00000436724 TCF21O43680 179 aa15.8■□□□□ 0.12
PTPRF-207ENST00000436724 SAMD13Q5VXD3 122 aa15.8■□□□□ 0.12
PTPRF-207ENST00000436724 LYZL1Q6UWQ5 148 aa15.8■□□□□ 0.12
PTPRF-207ENST00000436724 F8P00451 2351 aa15.8■□□□□ 0.12
PTPRF-207ENST00000436724 AGRNO00468 2067 aa15.79■□□□□ 0.12
PTPRF-207ENST00000436724 A0A1B0GUT8 65 aa15.79■□□□□ 0.12
PTPRF-207ENST00000436724 SNRPD3P62318 126 aaKnown RBP15.79■□□□□ 0.12
PTPRF-207ENST00000436724 TMEM61Q8N0U2 210 aa15.79■□□□□ 0.12
PTPRF-207ENST00000436724 LENEPQ9Y5L5 61 aa15.79■□□□□ 0.12
PTPRF-207ENST00000436724 LOC102724200A0A096LPH7 203 aaPredicted RBP15.79■□□□□ 0.12
PTPRF-207ENST00000436724 LINC01559Q495D7 138 aa15.78■□□□□ 0.12
PTPRF-207ENST00000436724 ATOH7Q8N100 152 aa15.78■□□□□ 0.12
PTPRF-207ENST00000436724 FAM19A4Q96LR4 140 aa15.78■□□□□ 0.12
PTPRF-207ENST00000436724 IGLC3P0DOY3 106 aa15.77■□□□□ 0.12
PTPRF-207ENST00000436724 BTF3P20290 206 aaKnown RBP15.77■□□□□ 0.11
PTPRF-207ENST00000436724 MAJINQ3KP22 176 aa15.77■□□□□ 0.11
PTPRF-207ENST00000436724 KRTAP10-3P60369 221 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 PMCHL1Q16048 86 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 Q6AWC8 147 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 SPATA12Q7Z6I5 190 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 DYNLRB2Q8TF09 96 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 ADARB2-AS1A8MUL3 147 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 CRLF1O75462 422 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 IGKV3-20P01619 116 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 RPS20P60866 119 aaKnown RBP15.76■□□□□ 0.11
PTPRF-207ENST00000436724 FER1L6-AS1Q8NA97 138 aa15.76■□□□□ 0.11
PTPRF-207ENST00000436724 BAHCC1Q9P281 2608 aa15.75■□□□□ 0.11
PTPRF-207ENST00000436724 IGLC6P0CF74 106 aa15.75■□□□□ 0.11
PTPRF-207ENST00000436724 RNASE4P34096 147 aaKnown RBP15.75■□□□□ 0.11
PTPRF-207ENST00000436724 DEFB114Q30KQ6 69 aa15.75■□□□□ 0.11
PTPRF-207ENST00000436724 NSUN5P1Q3KNT7 163 aa15.75■□□□□ 0.11
PTPRF-207ENST00000436724 CHCHD1Q96BP2 118 aaKnown RBP15.75■□□□□ 0.11
PTPRF-207ENST00000436724 CD300EQ496F6 205 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-207ENST00000436724 UQCR10Q9UDW1 63 aa15.75■□□□□ 0.11
PTPRF-207ENST00000436724 A0A0J9YX75 114 aa15.74■□□□□ 0.11
PTPRF-207ENST00000436724 LINC00614P0C842 121 aa15.74■□□□□ 0.11
PTPRF-207ENST00000436724 RIGQ13278 110 aa15.74■□□□□ 0.11
PTPRF-207ENST00000436724 IGHV1-24A0A0C4DH33 117 aa15.73■□□□□ 0.11
PTPRF-207ENST00000436724 GATD1Q8NB37 220 aa15.73■□□□□ 0.11
PTPRF-207ENST00000436724 JMJD1CQ15652 2540 aa15.73■□□□□ 0.11
PTPRF-207ENST00000436724 LINC00173Q6ZV60 143 aa15.72■□□□□ 0.11
PTPRF-207ENST00000436724 ZNF124Q15973 351 aa15.72■□□□□ 0.11
PTPRF-207ENST00000436724 TRAV9-2A0A087WT02 112 aa15.71■□□□□ 0.11
PTPRF-207ENST00000436724 DEFB131AP59861 70 aa15.71■□□□□ 0.11
PTPRF-207ENST00000436724 APRG1Q8IVJ8 170 aa15.71■□□□□ 0.11
PTPRF-207ENST00000436724 TMEM70Q9BUB7 260 aa15.71■□□□□ 0.11
PTPRF-207ENST00000436724 MSRB1Q9NZV6 116 aa15.71■□□□□ 0.11
PTPRF-207ENST00000436724 TENM1Q9UKZ4 2725 aa15.71■□□□□ 0.1
PTPRF-207ENST00000436724 TRAV21A0A0B4J279 112 aa15.7■□□□□ 0.1
PTPRF-207ENST00000436724 BATFQ16520 125 aa15.7■□□□□ 0.1
PTPRF-207ENST00000436724 KLLNB2CW77 178 aa15.7■□□□□ 0.1
PTPRF-207ENST00000436724 G0S2P27469 103 aa15.7■□□□□ 0.1
PTPRF-207ENST00000436724 Q6ZN92 141 aa15.7■□□□□ 0.1
PTPRF-207ENST00000436724 TRBV7-9A0A0J9YWB2 115 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms