RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 SMIM12Q96EX1 92 aa12.09□□□□□ -0.47
CALD1-209ENST00000436461 RNASE7Q9H1E1 156 aaKnown RBP12.09□□□□□ -0.47
CALD1-209ENST00000436461 RPL23P62829 140 aaKnown RBP12.08□□□□□ -0.48
CALD1-209ENST00000436461 TMEM241Q24JQ0 296 aa12.08□□□□□ -0.48
CALD1-209ENST00000436461 FAM74A3Q4VXF1 159 aa12.08□□□□□ -0.48
CALD1-209ENST00000436461 NAT8Q9UHE5 227 aa12.08□□□□□ -0.48
CALD1-209ENST00000436461 TYMSP04818 313 aa12.08□□□□□ -0.48
CALD1-209ENST00000436461 ADIRFQ15847 76 aa12.08□□□□□ -0.48
CALD1-209ENST00000436461 NEU1Q99519 415 aa12.08□□□□□ -0.48
CALD1-209ENST00000436461 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
CALD1-209ENST00000436461 F8W036 122 aa12.07□□□□□ -0.48
CALD1-209ENST00000436461 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
CALD1-209ENST00000436461 MIFP14174 115 aa12.07□□□□□ -0.48
CALD1-209ENST00000436461 RNASE8Q8TDE3 154 aaKnown RBP12.07□□□□□ -0.48
CALD1-209ENST00000436461 SDF2L1Q9HCN8 221 aa12.07□□□□□ -0.48
CALD1-209ENST00000436461 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
CALD1-209ENST00000436461 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
CALD1-209ENST00000436461 A0A0J9YWU9 116 aa12.06□□□□□ -0.48
CALD1-209ENST00000436461 PLAC8L1A1L4L8 177 aa12.06□□□□□ -0.48
CALD1-209ENST00000436461 GRIFINA4D1Z8 144 aa12.06□□□□□ -0.48
CALD1-209ENST00000436461 B4DEV8 164 aa12.06□□□□□ -0.48
CALD1-209ENST00000436461 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
CALD1-209ENST00000436461 NUDT10Q8NFP7 164 aa12.06□□□□□ -0.48
CALD1-209ENST00000436461 NUDT11Q96G61 164 aa12.06□□□□□ -0.48
CALD1-209ENST00000436461 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
CALD1-209ENST00000436461 KRBOX1C9JBD0 128 aa12.05□□□□□ -0.48
CALD1-209ENST00000436461 TDRG1Q3Y452 100 aa12.05□□□□□ -0.48
CALD1-209ENST00000436461 TMEM263Q8WUH6 116 aaKnown RBP12.05□□□□□ -0.48
CALD1-209ENST00000436461 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
CALD1-209ENST00000436461 LINC00467Q9BRT7 94 aa12.05□□□□□ -0.48
CALD1-209ENST00000436461 GSN-AS1Q9NRJ2 163 aa12.05□□□□□ -0.48
CALD1-209ENST00000436461 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 IBA57Q5T440 356 aaKnown RBP12.04□□□□□ -0.48
CALD1-209ENST00000436461 C11orf72Q8NBR9 251 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 ISOC2Q96AB3 205 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 C16orf74Q96GX8 76 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 U3KQK5 164 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 IGHV3-16A0A0C4DH30 117 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 P01737 135 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 GZMBP10144 247 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 ERVFC1-1P60608 527 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 KCNS1Q96KK3 526 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 BIN3Q9NQY0 253 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
CALD1-209ENST00000436461 TIMM8BQ9Y5J9 83 aaPredicted RBP12.04□□□□□ -0.48
CALD1-209ENST00000436461 TGP01266 2768 aa12.03□□□□□ -0.48
CALD1-209ENST00000436461 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
CALD1-209ENST00000436461 OR2D3Q8NGH3 330 aa12.03□□□□□ -0.48
CALD1-209ENST00000436461 TRGV11A0A075B6L2 103 aa12.02□□□□□ -0.49
CALD1-209ENST00000436461 SEC11CQ9BY50 192 aa12.02□□□□□ -0.49
CALD1-209ENST00000436461 NOP10Q9NPE3 64 aaKnown RBP12.02□□□□□ -0.49
CALD1-209ENST00000436461 MUC4Q99102 2169 aa12.01□□□□□ -0.49
CALD1-209ENST00000436461 H3BVH4 76 aa12.01□□□□□ -0.49
CALD1-209ENST00000436461 RNASE3P12724 160 aaKnown RBP12.01□□□□□ -0.49
CALD1-209ENST00000436461 SNURFLB1AK76 121 aa12□□□□□ -0.49
CALD1-209ENST00000436461 ZNF415Q09FC8 603 aa12□□□□□ -0.49
CALD1-209ENST00000436461 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
CALD1-209ENST00000436461 ZNF493Q6ZR52 646 aa12□□□□□ -0.49
CALD1-209ENST00000436461 SFRP2Q96HF1 295 aa12□□□□□ -0.49
CALD1-209ENST00000436461 C11orf68Q9H3H3 251 aaKnown RBP12□□□□□ -0.49
CALD1-209ENST00000436461 RPP21Q9H633 154 aaKnown RBP12□□□□□ -0.49
CALD1-209ENST00000436461 GATCO43716 136 aaKnown RBP12□□□□□ -0.49
CALD1-209ENST00000436461 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
CALD1-209ENST00000436461 ASIPP42127 132 aa12□□□□□ -0.49
CALD1-209ENST00000436461 TCL1AP56279 114 aa12□□□□□ -0.49
CALD1-209ENST00000436461 FAM231DQ6ZW35 169 aa12□□□□□ -0.49
CALD1-209ENST00000436461 IL17DQ8TAD2 202 aa12□□□□□ -0.49
CALD1-209ENST00000436461 C10orf91Q5T1B1 145 aa11.99□□□□□ -0.49
CALD1-209ENST00000436461 DKK2Q9UBU2 259 aa11.99□□□□□ -0.49
CALD1-209ENST00000436461 STAB2Q8WWQ8 2551 aa11.99□□□□□ -0.49
CALD1-209ENST00000436461 MUC21A0A0G2JKD1 596 aa11.98□□□□□ -0.49
CALD1-209ENST00000436461 MUC21A0A140T8X8 626 aa11.98□□□□□ -0.49
CALD1-209ENST00000436461 ARMS2P0C7Q2 107 aa11.98□□□□□ -0.49
CALD1-209ENST00000436461 NDUFA5Q16718 116 aa11.98□□□□□ -0.49
CALD1-209ENST00000436461 EDA2RQ9HAV5 297 aa11.98□□□□□ -0.49
CALD1-209ENST00000436461 OSTCQ9NRP0 149 aa11.98□□□□□ -0.49
CALD1-209ENST00000436461 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
CALD1-209ENST00000436461 V9GYV3 84 aa11.98□□□□□ -0.49
CALD1-209ENST00000436461 SSTP61278 116 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 PNRC1Q12796 327 aaPredicted RBP11.97□□□□□ -0.49
CALD1-209ENST00000436461 Q6ZTI0 123 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 C9orf85Q96MD7 179 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 TRGV1A0A0A0MS02 117 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 RNF212Q495C1 297 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 C15orf54Q8N8G6 183 aa11.97□□□□□ -0.49
CALD1-209ENST00000436461 CARHSP1Q9Y2V2 147 aaKnown RBP11.97□□□□□ -0.49
CALD1-209ENST00000436461 DNAH7Q8WXX0 4024 aa11.96□□□□□ -0.49
CALD1-209ENST00000436461 GAGE12BA1L429 117 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 GAGE7O76087 117 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 APOC3P02656 99 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 GAGE12FP0CL80 117 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 GAGE12GP0CL81 117 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 GAGE12IP0CL82 117 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 DEFB130BP0DP73 79 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 DEFB130AP0DP74 79 aa11.96□□□□□ -0.5
CALD1-209ENST00000436461 NANOS2P60321 138 aaKnown RBP11.96□□□□□ -0.5
CALD1-209ENST00000436461 DAZ2Q13117 558 aaKnown RBP11.96□□□□□ -0.5
CALD1-209ENST00000436461 GTSF1Q8WW33 167 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms