RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 P01737 135 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 S100A12P80511 92 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 DNLZQ5SXM8 178 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 PRR27Q6MZM9 219 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 GFRA4Q9GZZ7 299 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 PSG8Q9UQ74 426 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 LENEPQ9Y5L5 61 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 SELENOKQ9Y6D0 94 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
HMGCL-204ENST00000436439 TRAV8-1A0A0A6YYK1 113 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 TRBV7-9A0A0J9YWB2 115 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 RBMY1BA6NDE4 496 aaKnown RBP8.08□□□□□ -1.12
HMGCL-204ENST00000436439 RBMY1EA6NEQ0 496 aaKnown RBP8.08□□□□□ -1.12
HMGCL-204ENST00000436439 OR4C46A6NHA9 309 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 NPIPB6E9PJ23 425 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
HMGCL-204ENST00000436439 RBMY1DP0C7P1 496 aaKnown RBP8.08□□□□□ -1.12
HMGCL-204ENST00000436439 TCL1AP56279 114 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 TMEM136Q6ZRR5 245 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 ATP5L2Q7Z4Y8 100 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 DEFB125Q8N687 156 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 OR10D4PQ8NGN7 298 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 HIST1H2BLQ99880 126 aa8.08□□□□□ -1.12
HMGCL-204ENST00000436439 BIRC6Q9NR09 4857 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 FABP4P15090 132 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 TFPI2P48307 235 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 CMC4P56277 68 aaPredicted RBP8.07□□□□□ -1.12
HMGCL-204ENST00000436439 PDZD11Q5EBL8 140 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 TMEM78Q5T7P6 136 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 OR8A1Q8NGG7 326 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 OR10J6PQ8NGY7 276 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 SGK494Q96LW2 274 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 LINC00477Q96M19 166 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 PACRGQ96M98 296 aaPredicted RBP8.07□□□□□ -1.12
HMGCL-204ENST00000436439 VGLL1Q99990 258 aa8.07□□□□□ -1.12
HMGCL-204ENST00000436439 CA1P00915 261 aaPredicted RBP8.06□□□□□ -1.12
HMGCL-204ENST00000436439 AMBPP02760 352 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 CRISP2P16562 243 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 ZNF138P52744 262 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 Q0VG73 95 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 PSMG4Q5JS54 123 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
HMGCL-204ENST00000436439 FOXI2Q6ZQN5 318 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 NUP35Q8NFH5 326 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 NEU1Q99519 415 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 AGPAT4-IT1Q9H0P7 198 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 NIT2Q9NQR4 276 aa8.06□□□□□ -1.12
HMGCL-204ENST00000436439 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
HMGCL-204ENST00000436439 A0A0J9YX75 114 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 A0A1B0GXF2 115 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 A8MTW9 85 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 HIGD1CA8MV81 97 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 OR11H12B2RN74 326 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 ESDP10768 282 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 ERCC8Q13216 396 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 ODF3Q96PU9 254 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 NDFIP1Q9BT67 221 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 MAP6D1Q9H9H5 199 aa8.05□□□□□ -1.12
HMGCL-204ENST00000436439 SPINK4O60575 86 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 DUSP14O95147 198 aaKnown RBP8.04□□□□□ -1.12
HMGCL-204ENST00000436439 APCSP02743 223 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 CT45A10P0DMU9 189 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 RAB4BP61018 213 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 PYY3Q5JQD4 70 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 OR10J3Q5JRS4 329 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 ZC2HC1AQ96GY0 325 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
HMGCL-204ENST00000436439 F6UB75 175 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
HMGCL-204ENST00000436439 DEFB131AP59861 70 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 HBBP68871 147 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 HIST1H1AQ02539 215 aaPredicted RBP8.03□□□□□ -1.12
HMGCL-204ENST00000436439 ODF3L2Q3SX64 289 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 Q6AWC8 147 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 OR2D3Q8NGH3 330 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 Q8TAT8 98 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 C8orf49Q96NF6 230 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
HMGCL-204ENST00000436439 AGRNO00468 2067 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 A0A1B0GW15 77 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 GRIFINA4D1Z8 144 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 PCP4L1A6NKN8 68 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 ZNF705DP0CH99 300 aaPredicted RBP8.02□□□□□ -1.13
HMGCL-204ENST00000436439 ZNF705BP0CI00 300 aaPredicted RBP8.02□□□□□ -1.13
HMGCL-204ENST00000436439 PRB4P10163 310 aaPredicted RBP8.02□□□□□ -1.13
HMGCL-204ENST00000436439 HLA-DRB4P13762 266 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
HMGCL-204ENST00000436439 GDF5OSQ5U4N7 250 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 TMEM256Q8N2U0 113 aa8.02□□□□□ -1.13
HMGCL-204ENST00000436439 GTSF1Q8WW33 167 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms