RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RNF138Q8WVD3 245 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 CARD19Q96LW7 228 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 DENND4AQ7Z401 1863 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 F8VRH5 84 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 K7EQD1 137 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 NREPQ16612 68 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 IGHV4-28A0A0C4DH34 117 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 J3QQQ9 107 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 IFITM1P13164 125 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 SEM1Q6ZVN7 128 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 MRPL51Q4U2R6 128 aaKnown RBP8.88□□□□□ -0.99
SCN4A-201ENST00000435607 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
SCN4A-201ENST00000435607 PNRC2Q9NPJ4 139 aaKnown RBP8.88□□□□□ -0.99
SCN4A-201ENST00000435607 OPRPNQ99935 248 aaPredicted RBP8.88□□□□□ -0.99
SCN4A-201ENST00000435607 VOPP1Q96AW1 172 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 LY6G6FQ5SQ64 297 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 AMTNQ6UX39 209 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 WNK1Q9H4A3 2382 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 MYCNOSP40205 109 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 FAM120AOSQ5T036 256 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 C5orf38Q86SI9 138 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 HIST3H2BBQ8N257 126 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 HOXB4P17483 251 aaPredicted RBP8.87□□□□□ -0.99
SCN4A-201ENST00000435607 CXCL5P42830 114 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 HIST2H2BCQ6DN03 193 aa8.87□□□□□ -0.99
SCN4A-201ENST00000435607 H0YGX0 51 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 MLANAQ16655 118 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 GFI1Q99684 422 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 ETV2O00321 342 aaPredicted RBP8.86□□□□□ -0.99
SCN4A-201ENST00000435607 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 HHLA3Q9XRX5 114 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 PRSS47A8MTI9 375 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 F8W1H4 67 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 Q0VG73 95 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 Q9H8V8 135 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 NRXN2Q9P2S2 1712 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 KIR2DL5BA0A0G2JN68 375 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 KIR2DL5BA0A0G2JPC4 375 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 H0Y9J4 135 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 LOXP28300 417 aaPredicted RBP8.86□□□□□ -0.99
SCN4A-201ENST00000435607 KIR2DL5AQ8N109 375 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
SCN4A-201ENST00000435607 TRAV26-2A0A0B4J265 109 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 RBAKDNA6NC62 111 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 MED13Q9UHV7 2174 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 PTPRQQ9UMZ3 2332 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 J3QRE1 110 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 KAAG1Q9UBP8 84 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 IGLV3-9A0A075B6K5 115 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 A0A0G2JMZ2 1700 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 LRRC37A2A6NM11 1700 aa8.85□□□□□ -0.99
SCN4A-201ENST00000435607 UBE2V1Q13404 147 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 DEFB136Q30KP8 78 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 MALRD1Q5VYJ5 2156 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 FNDC1Q4ZHG4 1894 aaPredicted RBP8.84□□□□□ -0.99
SCN4A-201ENST00000435607 DYNAPQ8N1N2 210 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 GOLGB1Q14789 3259 aaKnown RBP8.84□□□□□ -0.99
SCN4A-201ENST00000435607 K7EM74 188 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 SLURP1P55000 103 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 LINC00479Q96M42 142 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 CXCL1P09341 107 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 LGALS9BQ3B8N2 356 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 LGALS9CQ6DKI2 356 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 IGFBPL1Q8WX77 278 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 HELZP42694 1942 aaKnown RBP8.84□□□□□ -0.99
SCN4A-201ENST00000435607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.84□□□□□ -0.99
SCN4A-201ENST00000435607 IGKV2-29A2NJV5 120 aaPredicted RBP8.84□□□□□ -0.99
SCN4A-201ENST00000435607 ACYP1P07311 99 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 CRYBA4P53673 196 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 RNASE13Q5GAN3 156 aaKnown RBP8.84□□□□□ -0.99
SCN4A-201ENST00000435607 PRSS57Q6UWY2 283 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
SCN4A-201ENST00000435607 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
SCN4A-201ENST00000435607 IGKV4-1P06312 121 aa8.83□□□□□ -1
SCN4A-201ENST00000435607 PRR31Q5SQ13 230 aa8.83□□□□□ -1
SCN4A-201ENST00000435607 FOXL2NBQ6ZUU3 175 aa8.83□□□□□ -1
SCN4A-201ENST00000435607 APRG1Q8IVJ8 170 aa8.83□□□□□ -1
SCN4A-201ENST00000435607 MGAMO43451 1857 aa8.83□□□□□ -1
SCN4A-201ENST00000435607 CEND1Q8N111 149 aa8.83□□□□□ -1
SCN4A-201ENST00000435607 ZNRD1Q9P1U0 126 aa8.83□□□□□ -1
SCN4A-201ENST00000435607 LINC00205P59089 165 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 GTSF1Q8WW33 167 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 C17orf58Q2M2W7 97 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 NDUFC2O95298 119 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 HILS1P60008 231 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 RS1O15537 224 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 LINC01620Q4KN68 170 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 A8MWP6 167 aa8.82□□□□□ -1
SCN4A-201ENST00000435607 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
SCN4A-201ENST00000435607 DIRC1Q969H9 104 aa8.81□□□□□ -1
SCN4A-201ENST00000435607 SORL1Q92673 2214 aa8.81□□□□□ -1
SCN4A-201ENST00000435607 C9orf118A6NHY6 69 aa8.81□□□□□ -1
SCN4A-201ENST00000435607 Q6ZVH6 145 aa8.81□□□□□ -1
SCN4A-201ENST00000435607 RNF144BQ7Z419 303 aa8.81□□□□□ -1
SCN4A-201ENST00000435607 MRPL35Q9NZE8 188 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms