RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ZNF705AQ6ZN79 300 aaPredicted RBP9.72□□□□□ -0.85
DDX56-204ENST00000431640 LCNL1Q6ZST4 164 aa9.72□□□□□ -0.85
DDX56-204ENST00000431640 ESM1Q9NQ30 184 aa9.72□□□□□ -0.85
DDX56-204ENST00000431640 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 TRAV21A0A0B4J279 112 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 SYS1-DBNDD2H3BUS1 97 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 M0R143 59 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 SSTP61278 116 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 OR8A1Q8NGG7 326 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 DUX5Q96PT3 197 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 C2orf88Q9BSF0 95 aa9.71□□□□□ -0.85
DDX56-204ENST00000431640 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.86
DDX56-204ENST00000431640 TMEM95Q3KNT9 176 aa9.71□□□□□ -0.86
DDX56-204ENST00000431640 UBE2E2Q96LR5 201 aa9.71□□□□□ -0.86
DDX56-204ENST00000431640 C11orf21Q9P2W6 132 aa9.71□□□□□ -0.86
DDX56-204ENST00000431640 UQCR10Q9UDW1 63 aa9.71□□□□□ -0.86
DDX56-204ENST00000431640 HIVEP2P31629 2446 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 LGALS9O00182 355 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 SNAI2O43623 268 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 TCF21O43680 179 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 LGALS1P09382 135 aaKnown RBP9.7□□□□□ -0.86
DDX56-204ENST00000431640 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
DDX56-204ENST00000431640 MUC21Q5SSG8 566 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 RNF152Q8N8N0 203 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 FAM19A4Q96LR4 140 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 ZNF702PQ9H963 129 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 SIGLEC8Q9NYZ4 499 aa9.7□□□□□ -0.86
DDX56-204ENST00000431640 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
DDX56-204ENST00000431640 SPATA12Q7Z6I5 190 aa9.69□□□□□ -0.86
DDX56-204ENST00000431640 ZFAND2AQ8N6M9 145 aa9.69□□□□□ -0.86
DDX56-204ENST00000431640 MYOZ3Q8TDC0 251 aa9.69□□□□□ -0.86
DDX56-204ENST00000431640 RNF185Q96GF1 192 aa9.69□□□□□ -0.86
DDX56-204ENST00000431640 MAP1LC3AQ9H492 121 aa9.69□□□□□ -0.86
DDX56-204ENST00000431640 LOC389332A0A1B0GUA5 103 aa9.68□□□□□ -0.86
DDX56-204ENST00000431640 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
DDX56-204ENST00000431640 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
DDX56-204ENST00000431640 SRD5A1P18405 259 aa9.68□□□□□ -0.86
DDX56-204ENST00000431640 MSRB1Q9NZV6 116 aa9.68□□□□□ -0.86
DDX56-204ENST00000431640 IGLC3P0DOY3 106 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 Q8N2B8 174 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 TMEM86BQ8N661 226 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 ZNF747Q9BV97 191 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 NXT2Q9NPJ8 142 aaKnown RBP9.67□□□□□ -0.86
DDX56-204ENST00000431640 LINC01546A6NGU7 62 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 OR4C46A6NHA9 309 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 DCANP1Q8TF63 244 aa9.67□□□□□ -0.86
DDX56-204ENST00000431640 TEP1Q99973 2627 aaKnown RBP9.66□□□□□ -0.86
DDX56-204ENST00000431640 IGKV3-7A0A075B6H7 116 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 HSBP1L1C9JCN9 74 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 CRLF1O75462 422 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 NPYP01303 97 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 HBDP02042 147 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 ASIPP42127 132 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 SNRPD3P62318 126 aaKnown RBP9.66□□□□□ -0.86
DDX56-204ENST00000431640 C10orf99Q6UWK7 81 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 SNHG12Q9BXW3 62 aa9.66□□□□□ -0.86
DDX56-204ENST00000431640 PRSS47A8MTI9 375 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 TNFRSF6BO95407 300 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 S100A4P26447 101 aaKnown RBP9.65□□□□□ -0.86
DDX56-204ENST00000431640 RNASE4P34096 147 aaKnown RBP9.65□□□□□ -0.86
DDX56-204ENST00000431640 PRR9Q5T870 116 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 LINC01545Q5VT33 79 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 ATOH7Q8N100 152 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 DEFB125Q8N687 156 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 ODF3Q96PU9 254 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 ST20Q9HBF5 79 aa9.65□□□□□ -0.86
DDX56-204ENST00000431640 NF1P21359 2839 aa9.65□□□□□ -0.87
DDX56-204ENST00000431640 SMKR1H3BMG3 65 aa9.64□□□□□ -0.87
DDX56-204ENST00000431640 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
DDX56-204ENST00000431640 MRAP2Q96G30 205 aa9.64□□□□□ -0.87
DDX56-204ENST00000431640 KLLNB2CW77 178 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 NCR2O95944 276 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 IGLL1P15814 213 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 EVI2AP22794 236 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 LEPP41159 167 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
DDX56-204ENST00000431640 Q6ZN92 141 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 PHLDA3Q9Y5J5 127 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 TIMM8BQ9Y5J9 83 aaPredicted RBP9.63□□□□□ -0.87
DDX56-204ENST00000431640 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 A0A087WW49 117 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 F6UB75 175 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 H3BVH4 76 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 J3KRW8 73 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 K7EQG2 157 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 DUSP14O95147 198 aaKnown RBP9.63□□□□□ -0.87
DDX56-204ENST00000431640 FCER1GP30273 86 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 HOXD3P31249 432 aaPredicted RBP9.63□□□□□ -0.87
DDX56-204ENST00000431640 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 HILS1P60008 231 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 Q8N8P6 123 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms