RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CCL24O00175 119 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 AJUBAQ96IF1 538 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 Q6ZPA2 131 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 LOXL1Q08397 574 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-208ENST00000430669 COA6Q5JTJ3 125 aaKnown RBP9.01□□□□□ -0.97
PTCH1-208ENST00000430669 RHOHQ15669 191 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 DYNAPQ8N1N2 210 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 IGLC2P0DOY2 106 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 MAPK1IP1LQ8NDC0 245 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 C11orf71Q6IPW1 123 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 C4orf3Q8WVX3 66 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 TMEM213A2RRL7 107 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 FXYD7P58549 80 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 CKS1BP61024 79 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 SMKR1H3BMG3 65 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 PMVKQ15126 192 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 A0A087WWL8 130 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 SNAI2O43623 268 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 APOMO95445 188 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 PRSS57Q6UWY2 283 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 TRAV25A0A0B4J276 109 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 SIGLEC8Q9NYZ4 499 aa9□□□□□ -0.97
PTCH1-208ENST00000430669 CACNA1AO00555 2505 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 MED14OSP0DP75 135 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 PRRC2CQ9Y520 2896 aaKnown RBP8.99□□□□□ -0.97
PTCH1-208ENST00000430669 SLC25A20O43772 301 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 AZU1P20160 251 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 MUC4Q99102 2169 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 NHP2Q9NX24 153 aaKnown RBP8.99□□□□□ -0.97
PTCH1-208ENST00000430669 ANXA2RQ3ZCQ2 193 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 SAMD5Q5TGI4 173 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 ESDP10768 282 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
PTCH1-208ENST00000430669 EGR2P11161 476 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-208ENST00000430669 SS18Q15532 418 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 DNAJC30Q96LL9 226 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 TRBV25-1A0A075B6N4 114 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 PAX2Q02962 417 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 ZNF664Q8N3J9 261 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 C3orf56Q8N813 242 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 PLA2G2EQ9NZK7 142 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 TRBV7-9A0A0J9YWB2 115 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 PSCAO43653 123 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 OR13C6PQ8NH95 151 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 A0A087WX48 190 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 TNFRSF13BO14836 293 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-208ENST00000430669 NEGR1Q7Z3B1 354 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 hDV102S1A0JD36 115 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 NCOR2Q9Y618 2525 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 LY6LH3BQJ8 138 aa8.98□□□□□ -0.97
PTCH1-208ENST00000430669 SPAG8Q99932 426 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-208ENST00000430669 TP53TG1Q9Y2A0 90 aa8.97□□□□□ -0.97
PTCH1-208ENST00000430669 IGKV1OR2-108A0A075B7D4 117 aa8.97□□□□□ -0.97
PTCH1-208ENST00000430669 CHD7Q9P2D1 2997 aa8.97□□□□□ -0.97
PTCH1-208ENST00000430669 HTTP42858 3142 aa8.97□□□□□ -0.97
PTCH1-208ENST00000430669 CRYGBP07316 175 aa8.97□□□□□ -0.97
PTCH1-208ENST00000430669 CD300EQ496F6 205 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-208ENST00000430669 C1orf159Q96HA4 380 aa8.97□□□□□ -0.97
PTCH1-208ENST00000430669 POLR3KQ9Y2Y1 108 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-208ENST00000430669 WISP2O76076 250 aa8.97□□□□□ -0.97
PTCH1-208ENST00000430669 SIVA1O15304 175 aa8.96□□□□□ -0.97
PTCH1-208ENST00000430669 C17orf77Q96MU5 243 aa8.96□□□□□ -0.97
PTCH1-208ENST00000430669 TRAV2A0A0B4J234 112 aa8.96□□□□□ -0.97
PTCH1-208ENST00000430669 Q6ZWC4 215 aa8.96□□□□□ -0.97
PTCH1-208ENST00000430669 PATE2Q6UY27 113 aa8.96□□□□□ -0.97
PTCH1-208ENST00000430669 TEX48A0A1B0GUV7 120 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 SDHAF1A6NFY7 115 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 CTRLP40313 264 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 E7EUB6 86 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 EBI3Q14213 229 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 C2orf66Q6UXQ4 117 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 F8VRH5 84 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 LEPROTO15243 131 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 LMO4P61968 165 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 H3BUT2 72 aa8.96□□□□□ -0.98
PTCH1-208ENST00000430669 IGF1P05019 195 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 HLA-DRB4P13762 266 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 C9orf66Q5T8R8 295 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 HLA-DRB4X5D2U9 266 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 COX8AP10176 69 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 A6NDX4 124 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 ODF3Q96PU9 254 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 KLK9Q9UKQ9 250 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
PTCH1-208ENST00000430669 XCL2Q9UBD3 114 aa8.94□□□□□ -0.98
PTCH1-208ENST00000430669 A0A1B0GWB2 263 aa8.94□□□□□ -0.98
PTCH1-208ENST00000430669 ZNF479Q96JC4 524 aa8.94□□□□□ -0.98
PTCH1-208ENST00000430669 BRWD1-AS2P59051 145 aa8.94□□□□□ -0.98
PTCH1-208ENST00000430669 CD5LO43866 347 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms