RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 NHP2Q9NX24 153 aaKnown RBP11.53□□□□□ -0.56
LINC00839-202ENST00000429940 IGHV3-49A0A0A0MS15 119 aa11.52□□□□□ -0.56
LINC00839-202ENST00000429940 TRAV8-2A0A0B4J237 113 aa11.52□□□□□ -0.56
LINC00839-202ENST00000429940 HLA-DRB4P13762 266 aa11.52□□□□□ -0.56
LINC00839-202ENST00000429940 ZFP36P26651 326 aaKnown RBP11.52□□□□□ -0.56
LINC00839-202ENST00000429940 C11orf71Q6IPW1 123 aa11.52□□□□□ -0.56
LINC00839-202ENST00000429940 CCDC140Q96MF4 163 aa11.52□□□□□ -0.56
LINC00839-202ENST00000429940 HLA-DRB4X5D2U9 266 aa11.52□□□□□ -0.56
LINC00839-202ENST00000429940 PRSS47A8MTI9 375 aa11.52□□□□□ -0.57
LINC00839-202ENST00000429940 PHLDA1Q8WV24 401 aaPredicted RBP11.52□□□□□ -0.57
LINC00839-202ENST00000429940 TM2D2Q9BX73 214 aa11.52□□□□□ -0.57
LINC00839-202ENST00000429940 ZNF207O43670 478 aaKnown RBP11.51□□□□□ -0.57
LINC00839-202ENST00000429940 SPANXN1Q5VSR9 72 aa11.51□□□□□ -0.57
LINC00839-202ENST00000429940 C8orf86Q6ZUL3 223 aa11.51□□□□□ -0.57
LINC00839-202ENST00000429940 Q6ZQT7 251 aa11.51□□□□□ -0.57
LINC00839-202ENST00000429940 METTL26Q96S19 204 aa11.51□□□□□ -0.57
LINC00839-202ENST00000429940 A0A087WX48 190 aa11.5□□□□□ -0.57
LINC00839-202ENST00000429940 SRSF1Q07955 248 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC00839-202ENST00000429940 MAPKAPK5-AS1Q8N8E1 139 aa11.5□□□□□ -0.57
LINC00839-202ENST00000429940 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
LINC00839-202ENST00000429940 SIRPDQ9H106 197 aa11.5□□□□□ -0.57
LINC00839-202ENST00000429940 G3V318 75 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 K7EMI3 77 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 RPL24P83731 157 aaKnown RBP11.49□□□□□ -0.57
LINC00839-202ENST00000429940 KLK9Q2XQG4 91 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 C9orf47Q6ZRZ4 202 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 HIF1ANQ9NWT6 349 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 KLK9Q9UKQ9 250 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 PLNP26678 52 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 EFNA4P52798 201 aa11.49□□□□□ -0.57
LINC00839-202ENST00000429940 SVEP1Q4LDE5 3571 aa11.48□□□□□ -0.57
LINC00839-202ENST00000429940 IGHV4-4A0A075B6R2 117 aa11.48□□□□□ -0.57
LINC00839-202ENST00000429940 H3BVH4 76 aa11.48□□□□□ -0.57
LINC00839-202ENST00000429940 LINC01548A6NM66 108 aa11.48□□□□□ -0.57
LINC00839-202ENST00000429940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.48□□□□□ -0.57
LINC00839-202ENST00000429940 TRBV7-1A0A0A6YYK4 115 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 TAL2Q16559 108 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 A0A1W2PPR1 153 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 E9PLD3 99 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 UBE2E1P51965 193 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 MRAP2Q96G30 205 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 AJUBAQ96IF1 538 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 C16orf92Q96LL3 132 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 SMIM2Q9BVW6 85 aa11.47□□□□□ -0.57
LINC00839-202ENST00000429940 HELZ2Q9BYK8 2649 aaKnown RBP11.46□□□□□ -0.57
LINC00839-202ENST00000429940 SPG11Q96JI7 2443 aa11.46□□□□□ -0.57
LINC00839-202ENST00000429940 IGLL5B9A064 214 aa11.46□□□□□ -0.57
LINC00839-202ENST00000429940 TMEM238C9JI98 176 aa11.46□□□□□ -0.57
LINC00839-202ENST00000429940 SAA4P35542 130 aa11.46□□□□□ -0.57
LINC00839-202ENST00000429940 PRR9Q5T870 116 aa11.46□□□□□ -0.57
LINC00839-202ENST00000429940 HIST1H4GQ99525 98 aa11.46□□□□□ -0.57
LINC00839-202ENST00000429940 NBPF19A0A087WUL8 3843 aa11.46□□□□□ -0.58
LINC00839-202ENST00000429940 F8VRH5 84 aa11.45□□□□□ -0.58
LINC00839-202ENST00000429940 H7C1H1 209 aa11.45□□□□□ -0.58
LINC00839-202ENST00000429940 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
LINC00839-202ENST00000429940 ZNF479Q96JC4 524 aa11.45□□□□□ -0.58
LINC00839-202ENST00000429940 U3KQE9 123 aa11.45□□□□□ -0.58
LINC00839-202ENST00000429940 USP9YO00507 2555 aaPredicted RBP11.45□□□□□ -0.58
LINC00839-202ENST00000429940 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
LINC00839-202ENST00000429940 J3KRW8 73 aa11.44□□□□□ -0.58
LINC00839-202ENST00000429940 KLK15Q9H2R5 256 aa11.44□□□□□ -0.58
LINC00839-202ENST00000429940 ATP5G2Q06055 141 aa11.44□□□□□ -0.58
LINC00839-202ENST00000429940 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
LINC00839-202ENST00000429940 M0R381 172 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 IGF1P05019 195 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 FBN2P35556 2912 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 SCGB3A1Q96QR1 104 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 CHTOPQ9Y3Y2 248 aaKnown RBP11.43□□□□□ -0.58
LINC00839-202ENST00000429940 CENPVL3A0A0U1RRI6 287 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 F8W1H4 67 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 C20orf173Q96LM9 149 aa11.43□□□□□ -0.58
LINC00839-202ENST00000429940 OR11H12B2RN74 326 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 SUMO2P61956 95 aaKnown RBP11.42□□□□□ -0.58
LINC00839-202ENST00000429940 C9orf139Q6ZV77 190 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 OR11H1Q8NG94 326 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 OR11H2Q8NH07 326 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 TOMM6Q96B49 74 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 LENEPQ9Y5L5 61 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 SPRY2O43597 315 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 GLMPQ8WWB7 406 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 RASL10AQ92737 203 aa11.42□□□□□ -0.58
LINC00839-202ENST00000429940 GCN1Q92616 2671 aaKnown RBP11.41□□□□□ -0.58
LINC00839-202ENST00000429940 WNK2Q9Y3S1 2297 aa11.41□□□□□ -0.58
LINC00839-202ENST00000429940 TRBV7-3A0A075B6L6 115 aa11.41□□□□□ -0.58
LINC00839-202ENST00000429940 SLC25A16P16260 332 aa11.41□□□□□ -0.58
LINC00839-202ENST00000429940 WFDC2Q14508 124 aa11.41□□□□□ -0.58
LINC00839-202ENST00000429940 C5orf56Q8N8D9 126 aa11.41□□□□□ -0.58
LINC00839-202ENST00000429940 H3BMG7 143 aa11.4□□□□□ -0.58
LINC00839-202ENST00000429940 S100A4P26447 101 aaKnown RBP11.4□□□□□ -0.58
LINC00839-202ENST00000429940 NEXN-AS1Q8NBZ9 246 aa11.4□□□□□ -0.58
LINC00839-202ENST00000429940 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
LINC00839-202ENST00000429940 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
LINC00839-202ENST00000429940 SPANXB1Q9NS25 103 aaPredicted RBP11.4□□□□□ -0.58
LINC00839-202ENST00000429940 POLQO75417 2590 aa11.4□□□□□ -0.58
LINC00839-202ENST00000429940 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
LINC00839-202ENST00000429940 LINC00477Q96M19 166 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms