RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MARVELD1Q9BSK0 173 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 SDF2L1Q9HCN8 221 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 MBD2Q9UBB5 411 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 RPH3ALQ9UNE2 315 aa10.07□□□□□ -0.8
MSH5-208ENST00000429846 A0A1W2PPV4 95 aa10.06□□□□□ -0.8
MSH5-208ENST00000429846 GOLT1AQ6ZVE7 132 aa10.06□□□□□ -0.8
MSH5-208ENST00000429846 FRZBQ92765 325 aa10.06□□□□□ -0.8
MSH5-208ENST00000429846 TREM1Q9NP99 234 aa10.06□□□□□ -0.8
MSH5-208ENST00000429846 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 SERTM2A0A1B0GWG4 89 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 GNRH2O43555 120 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 SSNA1O43805 119 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 CIDEAO60543 219 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 TYMSP04818 313 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 GATA1P15976 413 aaPredicted RBP10.05□□□□□ -0.8
MSH5-208ENST00000429846 FUSP35637 526 aaKnown RBP eCLIP10.05□□□□□ -0.8
MSH5-208ENST00000429846 NHLRC2Q8NBF2 726 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 SMIM3Q9BZL3 60 aa10.05□□□□□ -0.8
MSH5-208ENST00000429846 FBLL1A6NHQ2 334 aaKnown RBP10.04□□□□□ -0.8
MSH5-208ENST00000429846 F6UZH7 168 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 GCSHP23434 173 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 PPT1P50897 306 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 IFITM3Q01628 133 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 Q5VSD8 79 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 ASB13Q8WXK3 278 aa10.04□□□□□ -0.8
MSH5-208ENST00000429846 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
MSH5-208ENST00000429846 TRAV8-1A0A0A6YYK1 113 aa10.03□□□□□ -0.8
MSH5-208ENST00000429846 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
MSH5-208ENST00000429846 PSCAO43653 123 aa10.03□□□□□ -0.8
MSH5-208ENST00000429846 PFN1P07737 140 aaKnown RBP10.03□□□□□ -0.8
MSH5-208ENST00000429846 INAFM2P0DMQ5 153 aa10.03□□□□□ -0.8
MSH5-208ENST00000429846 DEFA1P59665 94 aa10.03□□□□□ -0.8
MSH5-208ENST00000429846 DEFA3P59666 94 aa10.03□□□□□ -0.8
MSH5-208ENST00000429846 NTN5Q8WTR8 489 aaPredicted RBP10.03□□□□□ -0.8
MSH5-208ENST00000429846 TVP23CQ96ET8 276 aa10.03□□□□□ -0.8
MSH5-208ENST00000429846 TRAV8-6A0A0B4J262 113 aa10.02□□□□□ -0.81
MSH5-208ENST00000429846 RAB2AP61019 212 aa10.02□□□□□ -0.81
MSH5-208ENST00000429846 RHOHQ15669 191 aa10.02□□□□□ -0.81
MSH5-208ENST00000429846 OR10G9Q8NGN4 311 aa10.02□□□□□ -0.81
MSH5-208ENST00000429846 OR10G7Q8NGN6 311 aa10.02□□□□□ -0.81
MSH5-208ENST00000429846 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
MSH5-208ENST00000429846 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
MSH5-208ENST00000429846 K7EQM0 130 aa10.01□□□□□ -0.81
MSH5-208ENST00000429846 EIF3GO75821 320 aaKnown RBP eCLIP10.01□□□□□ -0.81
MSH5-208ENST00000429846 CDC34P49427 236 aaPredicted RBP10.01□□□□□ -0.81
MSH5-208ENST00000429846 GNG5P63218 68 aa10.01□□□□□ -0.81
MSH5-208ENST00000429846 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
MSH5-208ENST00000429846 C5orf17Q8NAS9 161 aa10.01□□□□□ -0.81
MSH5-208ENST00000429846 WFDC1Q9HC57 220 aa10.01□□□□□ -0.81
MSH5-208ENST00000429846 IGLV5-52A0A0A0MRZ9 124 aa10□□□□□ -0.81
MSH5-208ENST00000429846 LRCOL1A6NCL2 159 aa10□□□□□ -0.81
MSH5-208ENST00000429846 IBA57-AS1B1ANH7 110 aa10□□□□□ -0.81
MSH5-208ENST00000429846 TAAR5O14804 337 aa10□□□□□ -0.81
MSH5-208ENST00000429846 STAG3L2P0CL84 134 aa10□□□□□ -0.81
MSH5-208ENST00000429846 STAG3L3P0CL85 134 aa10□□□□□ -0.81
MSH5-208ENST00000429846 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
MSH5-208ENST00000429846 ZFP69Q49AA0 526 aa10□□□□□ -0.81
MSH5-208ENST00000429846 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
MSH5-208ENST00000429846 OR2G3Q8NGZ4 309 aa10□□□□□ -0.81
MSH5-208ENST00000429846 TMEM70Q9BUB7 260 aa10□□□□□ -0.81
MSH5-208ENST00000429846 HMGB3O15347 200 aaKnown RBP9.99□□□□□ -0.81
MSH5-208ENST00000429846 RS1O15537 224 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 TCRAP04437 139 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 MGST1P10620 155 aaKnown RBP9.99□□□□□ -0.81
MSH5-208ENST00000429846 LAGE3Q14657 143 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 OR10J3Q5JRS4 329 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 LELP1Q5T871 98 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 CFAP126Q5VTH2 177 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 PTH2Q96A98 100 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 SH3BGRL3Q9H299 93 aa9.99□□□□□ -0.81
MSH5-208ENST00000429846 GCGP01275 180 aa9.98□□□□□ -0.81
MSH5-208ENST00000429846 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
MSH5-208ENST00000429846 PSMG3Q9BT73 122 aaPredicted RBP9.98□□□□□ -0.81
MSH5-208ENST00000429846 MBP02144 154 aa9.97□□□□□ -0.81
MSH5-208ENST00000429846 SMUG1Q53HV7 270 aa9.97□□□□□ -0.81
MSH5-208ENST00000429846 Q8N814 137 aa9.97□□□□□ -0.81
MSH5-208ENST00000429846 SGK494Q96LW2 274 aa9.97□□□□□ -0.81
MSH5-208ENST00000429846 GTSF1LQ9H1H1 148 aa9.97□□□□□ -0.81
MSH5-208ENST00000429846 PSG8Q9UQ74 426 aa9.97□□□□□ -0.81
MSH5-208ENST00000429846 FAM229AH3BQW9 127 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 GCHFRP30047 84 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.82
MSH5-208ENST00000429846 SERF2P84101 59 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 FLI1Q01543 452 aaPredicted RBP9.96□□□□□ -0.82
MSH5-208ENST00000429846 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 PIK3CD-AS1Q5SR53 167 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 DPPA3Q6W0C5 159 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 CYB561D1Q8N8Q1 229 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 TMEM75Q8N9X5 138 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 HSD17B11Q8NBQ5 300 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 RAB24Q969Q5 203 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 Q9HAA7 133 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 C11orf21Q9P2W6 132 aa9.96□□□□□ -0.82
MSH5-208ENST00000429846 IGLV2-11P01706 119 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms