RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 C10orf99Q6UWK7 81 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 LYPD5Q6UWN5 251 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 NDUFA11Q86Y39 141 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 TCEAL4Q96EI5 215 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 VPS25Q9BRG1 176 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 LIMD2Q9BT23 127 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 HEATR1Q9H583 2144 aaKnown RBP0.81□□□□□ -2.28
GYPB-201ENST00000429670 TPT1P8Q9HAU6 139 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 SAR1AQ9NR31 198 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 FER1L6Q2WGJ9 1857 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 MUC4Q99102 2169 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 CEP152O94986 1710 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 PRG4Q92954 1404 aaPredicted RBP0.81□□□□□ -2.28
GYPB-201ENST00000429670 NCOA6Q14686 2063 aaPredicted RBP0.8□□□□□ -2.28
GYPB-201ENST00000429670 KDM5CP41229 1560 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 ALPK3Q96L96 1907 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 A0A0G2JMM0 328 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 TMEM30CPA0ZSE6 113 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 HIGD1CA8MV81 97 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 M0R2Z0 102 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 TPST1O60507 370 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 XAF1Q6GPH4 301 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 Q6ZQY7 126 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 SLC25A26Q70HW3 274 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 Q8N6K4 173 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 PFDN5Q99471 154 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 MRPL36Q9P0J6 103 aaKnown RBP0.8□□□□□ -2.28
GYPB-201ENST00000429670 USP54Q70EL1 1684 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 MED12Q93074 2177 aa0.8□□□□□ -2.28
GYPB-201ENST00000429670 DLG5Q8TDM6 1919 aa0.79□□□□□ -2.28
GYPB-201ENST00000429670 PEAK1Q9H792 1746 aa0.79□□□□□ -2.28
GYPB-201ENST00000429670 ASCC3Q8N3C0 2202 aaKnown RBP0.79□□□□□ -2.28
GYPB-201ENST00000429670 RPL37AP61513 92 aaKnown RBP0.79□□□□□ -2.28
GYPB-201ENST00000429670 CTAGE3PQ8IX95 158 aa0.79□□□□□ -2.28
GYPB-201ENST00000429670 ATG5Q9H1Y0 275 aa0.79□□□□□ -2.28
GYPB-201ENST00000429670 XIRP1Q702N8 1843 aaKnown RBP0.79□□□□□ -2.28
GYPB-201ENST00000429670 CPDO75976 1380 aa0.79□□□□□ -2.28
GYPB-201ENST00000429670 TET1Q8NFU7 2136 aa0.79□□□□□ -2.28
GYPB-201ENST00000429670 ROS1P08922 2347 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 SIP14410 1827 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 TRBV30A0A0K0K1B3 111 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 CXorf51AA0A1B0GTR3 108 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 K7EIL1 84 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 COX4I1P13073 169 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 SMIM3Q9BZL3 60 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 LSM2Q9Y333 95 aaKnown RBP0.78□□□□□ -2.28
GYPB-201ENST00000429670 CNTRLQ7Z7A1 2325 aa0.78□□□□□ -2.28
GYPB-201ENST00000429670 TRBV10-1A0A0K0K1A3 114 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 CCDC179H3BU77 68 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 LINC00694P0DN24 101 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 POLR2JP52435 117 aaKnown RBP0.77□□□□□ -2.29
GYPB-201ENST00000429670 CAV3P56539 151 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 CLLU1Q5K131 121 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 SCIMPQ6UWF3 145 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 Q6ZS92 163 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 DYNLRB2Q8TF09 96 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 CCL19Q99731 98 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 NOP16Q9Y3C1 178 aaKnown RBP0.77□□□□□ -2.29
GYPB-201ENST00000429670 CCDC171Q6TFL3 1326 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 E9PCH4 1651 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 PTPRFP10586 1907 aa0.77□□□□□ -2.29
GYPB-201ENST00000429670 SOGA1O94964 1423 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 NBDYA0A0U1RRE5 68 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 J3QLW9 94 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 NPFFO15130 113 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 SARNPP82979 210 aaKnown RBP0.76□□□□□ -2.29
GYPB-201ENST00000429670 CCDC58Q4VC31 144 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 UNQ5815/PRO19632Q6UWF5 114 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 SNX29P2Q8IUI4 249 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 TANC2Q9HCD6 1990 aa0.76□□□□□ -2.29
GYPB-201ENST00000429670 PHRF1Q9P1Y6 1649 aaKnown RBP0.75□□□□□ -2.29
GYPB-201ENST00000429670 TEX49A0A1B0GTD5 131 aa0.75□□□□□ -2.29
GYPB-201ENST00000429670 NDUFA2O43678 99 aa0.75□□□□□ -2.29
GYPB-201ENST00000429670 IGKCP01834 107 aa0.75□□□□□ -2.29
GYPB-201ENST00000429670 RPS25P62851 125 aaKnown RBP0.75□□□□□ -2.29
GYPB-201ENST00000429670 ERG28Q9UKR5 140 aa0.75□□□□□ -2.29
GYPB-201ENST00000429670 KIAA1549LQ6ZVL6 1849 aa0.75□□□□□ -2.29
GYPB-201ENST00000429670 KIDINS220Q9ULH0 1771 aa0.75□□□□□ -2.29
GYPB-201ENST00000429670 SNRNP200O75643 2136 aaKnown RBP0.74□□□□□ -2.29
GYPB-201ENST00000429670 CHD3Q12873 2000 aaKnown RBP0.74□□□□□ -2.29
GYPB-201ENST00000429670 FAM236AA0A1B0GUQ0 79 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 FAM236BA0A1B0GV22 79 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 CCKP06307 115 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 FXYD6P3P58550 94 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 SELENOWP63302 87 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 FXYD3Q14802 87 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 LINC01545Q5VT33 79 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 TSTD1Q8NFU3 115 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 TMEM191AQ9H0A3 160 aa0.74□□□□□ -2.29
GYPB-201ENST00000429670 SPAG17Q6Q759 2223 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 ZNF670-ZNF695F2Z2N8 137 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 K7EP13 123 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 K7ERU9 68 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 APOC1P02654 83 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 IL7P13232 177 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 GUCA1AP43080 201 aaPredicted RBP0.73□□□□□ -2.29
GYPB-201ENST00000429670 COPZ1P61923 177 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms