RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 RNASE4P34096 147 aaKnown RBP12.23□□□□□ -0.45
MBD4-203ENST00000429544 KIR3DS1Q14943 382 aa12.23□□□□□ -0.45
MBD4-203ENST00000429544 PET117Q6UWS5 81 aa12.23□□□□□ -0.45
MBD4-203ENST00000429544 FAM19A4Q96LR4 140 aa12.23□□□□□ -0.45
MBD4-203ENST00000429544 IGHV4OR15-8A0A075B7B6 117 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 A0A087WW49 117 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 SNAI2O43623 268 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 TCF21O43680 179 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 PPBPP02775 128 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 ELANEP08246 267 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 ID1P41134 155 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 TFPI2P48307 235 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 HIST2H2BCQ6DN03 193 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 DCANP1Q8TF63 244 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 ZNF747Q9BV97 191 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
MBD4-203ENST00000429544 SYNJ2BPP57105 145 aa12.22□□□□□ -0.45
MBD4-203ENST00000429544 Q6ZN92 141 aa12.21□□□□□ -0.45
MBD4-203ENST00000429544 SMIM15Q7Z3B0 74 aa12.21□□□□□ -0.45
MBD4-203ENST00000429544 MYOZ3Q8TDC0 251 aa12.21□□□□□ -0.45
MBD4-203ENST00000429544 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
MBD4-203ENST00000429544 CACNG7P62955 275 aa12.21□□□□□ -0.45
MBD4-203ENST00000429544 PMCHL2Q9BQD1 86 aa12.21□□□□□ -0.45
MBD4-203ENST00000429544 MS4A6AQ9H2W1 248 aa12.21□□□□□ -0.45
MBD4-203ENST00000429544 SPRY2O43597 315 aa12.2□□□□□ -0.46
MBD4-203ENST00000429544 ANXA2RQ3ZCQ2 193 aa12.2□□□□□ -0.46
MBD4-203ENST00000429544 hDV102S1A0JD36 115 aa12.2□□□□□ -0.46
MBD4-203ENST00000429544 MRPL52Q86TS9 123 aaKnown RBP12.2□□□□□ -0.46
MBD4-203ENST00000429544 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 HBDP02042 147 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 HNRNPA3P51991 378 aaKnown RBP12.19□□□□□ -0.46
MBD4-203ENST00000429544 LINC01545Q5VT33 79 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 SAMD13Q5VXD3 122 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 LAMTOR2Q9Y2Q5 125 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 ZNF688P0C7X2 276 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 S100A4P26447 101 aaKnown RBP12.19□□□□□ -0.46
MBD4-203ENST00000429544 HOXD3P31249 432 aaPredicted RBP12.19□□□□□ -0.46
MBD4-203ENST00000429544 ASIPP42127 132 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 APRG1Q8IVJ8 170 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 WFDC12Q8WWY7 111 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 UBE2E2Q96LR5 201 aa12.19□□□□□ -0.46
MBD4-203ENST00000429544 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
MBD4-203ENST00000429544 BATFQ16520 125 aa12.18□□□□□ -0.46
MBD4-203ENST00000429544 WFDC11Q8NEX6 87 aa12.18□□□□□ -0.46
MBD4-203ENST00000429544 TRBV7-9A0A0J9YWB2 115 aa12.18□□□□□ -0.46
MBD4-203ENST00000429544 PSMG4Q5JS54 123 aa12.18□□□□□ -0.46
MBD4-203ENST00000429544 TENM4Q6N022 2769 aa12.18□□□□□ -0.46
MBD4-203ENST00000429544 M0R381 172 aa12.17□□□□□ -0.46
MBD4-203ENST00000429544 C18orf65Q6ZTR6 163 aa12.17□□□□□ -0.46
MBD4-203ENST00000429544 RNF152Q8N8N0 203 aa12.17□□□□□ -0.46
MBD4-203ENST00000429544 NBPF19A0A087WUL8 3843 aa12.17□□□□□ -0.46
MBD4-203ENST00000429544 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
MBD4-203ENST00000429544 LGALS9O00182 355 aa12.17□□□□□ -0.46
MBD4-203ENST00000429544 OR2K2Q8NGT1 345 aa12.17□□□□□ -0.46
MBD4-203ENST00000429544 GNRH2O43555 120 aa12.16□□□□□ -0.46
MBD4-203ENST00000429544 DEFB136Q30KP8 78 aa12.16□□□□□ -0.46
MBD4-203ENST00000429544 NXT2Q9NPJ8 142 aaKnown RBP12.16□□□□□ -0.46
MBD4-203ENST00000429544 HSBP1L1C9JCN9 74 aa12.16□□□□□ -0.46
MBD4-203ENST00000429544 NUTF2P61970 127 aaKnown RBP12.16□□□□□ -0.46
MBD4-203ENST00000429544 Q8N2B8 174 aa12.16□□□□□ -0.46
MBD4-203ENST00000429544 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
MBD4-203ENST00000429544 KLLNB2CW77 178 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 K7EQG2 157 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 TSPOP30536 169 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 TP73-AS1Q9UF72 201 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 ZNF469Q96JG9 3925 aaPredicted RBP12.15□□□□□ -0.46
MBD4-203ENST00000429544 LINC01546A6NGU7 62 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 SLURP1P55000 103 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 SNRPD3P62318 126 aaKnown RBP12.15□□□□□ -0.46
MBD4-203ENST00000429544 NRACQ8N912 160 aa12.15□□□□□ -0.46
MBD4-203ENST00000429544 TLN2Q9Y4G6 2542 aa12.15□□□□□ -0.47
MBD4-203ENST00000429544 LEPP41159 167 aa12.14□□□□□ -0.47
MBD4-203ENST00000429544 IFI27L1Q96BM0 104 aa12.14□□□□□ -0.47
MBD4-203ENST00000429544 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
MBD4-203ENST00000429544 MED14OSP0DP75 135 aa12.14□□□□□ -0.47
MBD4-203ENST00000429544 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
MBD4-203ENST00000429544 Q8N8P6 123 aa12.14□□□□□ -0.47
MBD4-203ENST00000429544 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
MBD4-203ENST00000429544 IGLV2-18A0A075B6J9 118 aa12.13□□□□□ -0.47
MBD4-203ENST00000429544 TRAV12-3A0A0B4J271 114 aa12.13□□□□□ -0.47
MBD4-203ENST00000429544 A0A0J9YX75 114 aa12.13□□□□□ -0.47
MBD4-203ENST00000429544 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
MBD4-203ENST00000429544 FCER1GP30273 86 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 KHDC1LQ5JSQ8 128 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 MRAP2Q96G30 205 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 AGRNO00468 2067 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 TCTEX1D4Q5JR98 221 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 FAM159AQ6UWV7 190 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 ADAMTSL5Q6ZMM2 481 aa12.12□□□□□ -0.47
MBD4-203ENST00000429544 C14orf178Q8N769 122 aaPredicted RBP12.12□□□□□ -0.47
MBD4-203ENST00000429544 MUC4Q99102 2169 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 C7orf71A4D174 169 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 LGALS9CQ6DKI2 356 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms