RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 Q8N976 141 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 KCNS1Q96KK3 526 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 AAMDCQ9H7C9 122 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 RBMY1BA6NDE4 496 aaKnown RBP7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 RBMY1EA6NEQ0 496 aaKnown RBP7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 RBMY1DP0C7P1 496 aaKnown RBP7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 PSG3Q16557 428 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 TMEM183BQ1AE95 376 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 MRPL54Q6P161 138 aaKnown RBP7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 SMIM12Q96EX1 92 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 SAMD10Q9BYL1 202 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 MAP6D1Q9H9H5 199 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 KLF12Q9Y4X4 402 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 NACAE9PAV3 2078 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 MUC21A0A0G2JKD1 596 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 MUC21A0A140T8X8 626 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 M0R143 59 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 RPL35AP18077 110 aaKnown RBP7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 TDRG1Q3Y452 100 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 MUC21Q5SSG8 566 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 RCHY1Q96PM5 261 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 OTORQ9NRC9 128 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 FBN3Q75N90 2809 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 A0A087X0K7 114 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 TMSB15BA0A087X1C1 80 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 CT45A10P0DMU9 189 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 HTN1P15515 57 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 SRIP30626 198 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 SPINK13Q1W4C9 94 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 C5orf17Q8NAS9 161 aa7.05□□□□□ -1.28
HMGCLL1-206ENST00000428842 ZNF253O75346 499 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 APCSP02743 223 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 SLAQ13239 276 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 NUP35Q8NFH5 326 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 ZC2HC1AQ96GY0 325 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 NEU1Q99519 415 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 LYSTQ99698 3801 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 MIEN1Q9BRT3 115 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 ATG101Q9BSB4 218 aa7.04□□□□□ -1.28
HMGCLL1-206ENST00000428842 ZNF324O75467 553 aaPredicted RBP7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 CRIP1P50238 77 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 NIT1Q86X76 327 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 TSKUQ8WUA8 353 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 VAMP8Q9BV40 100 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 MLST8Q9BVC4 326 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 AMTP48728 403 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 PDE6HQ13956 83 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 ATP5L2Q7Z4Y8 100 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 C19orf73Q9NVV2 129 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 PSG8Q9UQ74 426 aa7.03□□□□□ -1.28
HMGCLL1-206ENST00000428842 A0A1B0GXF2 115 aa7.02□□□□□ -1.28
HMGCLL1-206ENST00000428842 CTRLP40313 264 aa7.02□□□□□ -1.28
HMGCLL1-206ENST00000428842 UBE2G1P62253 170 aa7.02□□□□□ -1.28
HMGCLL1-206ENST00000428842 PSG9Q00887 426 aa7.02□□□□□ -1.28
HMGCLL1-206ENST00000428842 Q86TA4 180 aa7.02□□□□□ -1.28
HMGCLL1-206ENST00000428842 OR8A1Q8NGG7 326 aa7.02□□□□□ -1.28
HMGCLL1-206ENST00000428842 GPR82Q96P67 336 aa7.02□□□□□ -1.28
HMGCLL1-206ENST00000428842 IGHV3OR16-12A0A075B7B8 117 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 OR11H12B2RN74 326 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 RBMY1A1P0DJD3 496 aaKnown RBP7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 RBMY1CP0DJD4 496 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 SNRPD3P62318 126 aaKnown RBP7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 RBMY1FQ15415 496 aaKnown RBP7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 WFDC9Q8NEX5 89 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 ZNF492Q9P255 531 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 C11orf21Q9P2W6 132 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 XCL2Q9UBD3 114 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
HMGCLL1-206ENST00000428842 A0A0J9YX75 114 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 C19orf71A6NCJ1 209 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 TCAPO15273 167 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 LTAP01374 205 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 PMCHP20382 165 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 RNASE4P34096 147 aaKnown RBP7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 CSN1S1P47710 185 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 KRTDAPP60985 99 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 CT83Q5H943 113 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 ZNF705AQ6ZN79 300 aaPredicted RBP7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 FMC1Q96HJ9 113 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 SLC50A1Q9BRV3 221 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 HIGD1CA8MV81 97 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 C3orf79P0CE67 100 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 S100A7AQ86SG5 101 aa7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
HMGCLL1-206ENST00000428842 TRAV12-3A0A0B4J271 114 aa7□□□□□ -1.29
HMGCLL1-206ENST00000428842 SPAG8Q99932 426 aaPredicted RBP7□□□□□ -1.29
HMGCLL1-206ENST00000428842 RPP21Q9H633 154 aaKnown RBP7□□□□□ -1.29
HMGCLL1-206ENST00000428842 H3BMM0 161 aa7□□□□□ -1.29
HMGCLL1-206ENST00000428842 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
HMGCLL1-206ENST00000428842 Q8N1Y9 231 aa7□□□□□ -1.29
HMGCLL1-206ENST00000428842 TIMM8BQ9Y5J9 83 aaPredicted RBP7□□□□□ -1.29
HMGCLL1-206ENST00000428842 MUC4Q99102 2169 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 TRBV6-1A0A0K0K1D8 114 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 OR4C46A6NHA9 309 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 NPIPB6E9PJ23 425 aa6.99□□□□□ -1.29
HMGCLL1-206ENST00000428842 BEAN1Q3B7T3 259 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms