RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 C2orf66Q6UXQ4 117 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 ANKHD1Q8IWZ3 2542 aaKnown RBP7.63□□□□□ -1.19
SNX13-203ENST00000428135 PLXNB3Q9ULL4 1909 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 FNDC10F2Z333 226 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 F8WEM9 126 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 NAV3Q8IVL0 2385 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.63□□□□□ -1.19
SNX13-203ENST00000428135 MYMXA0A1B0GTQ4 84 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 IGKV2-29A2NJV5 120 aaPredicted RBP7.63□□□□□ -1.19
SNX13-203ENST00000428135 LGALS1P09382 135 aaKnown RBP7.63□□□□□ -1.19
SNX13-203ENST00000428135 WIPF2Q8TF74 440 aaPredicted RBP7.63□□□□□ -1.19
SNX13-203ENST00000428135 SMPXQ9UHP9 88 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 NKAPP1Q8N9T2 125 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 OBSL1O75147 1896 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 PTPRSQ13332 1948 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 CHD3Q12873 2000 aaKnown RBP7.63□□□□□ -1.19
SNX13-203ENST00000428135 PRSS29PA6NIE9 313 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 SPINK8P0C7L1 97 aa7.63□□□□□ -1.19
SNX13-203ENST00000428135 LOC105371267A0A1B0GV96 52 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 A8MWV9 139 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 PROP1O75360 226 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 IGHV3-30P01768 117 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 IGHV3-33P01772 117 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 IGHV3-30-5P0DP03 117 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 LYL1P12980 280 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 ATXN8Q156A1 80 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 FXYD5Q96DB9 178 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 TRAV8-4A0A0B4J246 113 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 LHBP01229 141 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 C1orf194Q5T5A4 169 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 CFHR4Q92496 578 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 SPAG8Q99932 426 aaPredicted RBP7.62□□□□□ -1.19
SNX13-203ENST00000428135 CITED2Q99967 270 aaPredicted RBP7.62□□□□□ -1.19
SNX13-203ENST00000428135 ANAPC10Q9UM13 185 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 H3BMM0 161 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 SEC11AP67812 179 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 MSMPQ1L6U9 139 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 UBE2WQ96B02 151 aa7.62□□□□□ -1.19
SNX13-203ENST00000428135 INAFM1C9JVW0 142 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 RHODO00212 210 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 C9orf66Q5T8R8 295 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 ZNF48Q96MX3 618 aaPredicted RBP7.61□□□□□ -1.19
SNX13-203ENST00000428135 PRSS46E5RG02 174 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 HSD52Q0P140 79 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 EDA2RQ9HAV5 297 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 IGLV3-1P01715 115 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 SLAQ13239 276 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 FAM104BQ5XKR9 115 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 MTURNQ8N3F0 131 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 MPV17L2Q567V2 206 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 OR11H6Q8NGC7 330 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 PRRC2AP48634 2157 aaKnown RBP7.61□□□□□ -1.19
SNX13-203ENST00000428135 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 EREGO14944 169 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 DEFB135Q30KP9 77 aa7.61□□□□□ -1.19
SNX13-203ENST00000428135 IGHV4-4A0A075B6R2 117 aa7.6□□□□□ -1.19
SNX13-203ENST00000428135 A0A1B0GW64 132 aa7.6□□□□□ -1.19
SNX13-203ENST00000428135 UBE2CO00762 179 aa7.6□□□□□ -1.19
SNX13-203ENST00000428135 MRPL53Q96EL3 112 aaKnown RBP7.6□□□□□ -1.19
SNX13-203ENST00000428135 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
SNX13-203ENST00000428135 NAV2Q8IVL1 2488 aa7.6□□□□□ -1.19
SNX13-203ENST00000428135 ARHGAP21Q5T5U3 1957 aa7.6□□□□□ -1.19
SNX13-203ENST00000428135 NPYP01303 97 aa7.6□□□□□ -1.19
SNX13-203ENST00000428135 GATA1P15976 413 aaPredicted RBP7.6□□□□□ -1.19
SNX13-203ENST00000428135 PLA2G2AP14555 144 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 Q8N7P7 452 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 C5orf56Q8N8D9 126 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 TMEM126AQ9H061 195 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 LY96Q9Y6Y9 160 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 TRBV12-3P01733 135 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 Q8N9W7 124 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 KLF5Q13887 457 aaPredicted RBP7.59□□□□□ -1.19
SNX13-203ENST00000428135 MORN5Q5VZ52 161 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 ADAMTSL5Q6ZMM2 481 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 NCOR1P1Q9H4R4 102 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 EGR2P11161 476 aaPredicted RBP7.59□□□□□ -1.19
SNX13-203ENST00000428135 FOXI2Q6ZQN5 318 aa7.59□□□□□ -1.19
SNX13-203ENST00000428135 DEFB105AQ8NG35 78 aa7.59□□□□□ -1.2
SNX13-203ENST00000428135 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
SNX13-203ENST00000428135 GHRHP01286 108 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 GYPEP15421 78 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 NDUFAF3Q9BU61 184 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 C22orf34Q6ZV56 151 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 C5orf38Q86SI9 138 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 C18orf32Q8TCD1 76 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 F8W735 103 aaPredicted RBP7.58□□□□□ -1.2
SNX13-203ENST00000428135 UBE2BP63146 152 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 GFRA4Q9GZZ7 299 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
SNX13-203ENST00000428135 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 ZNF106Q9H2Y7 1883 aaKnown RBP7.58□□□□□ -1.2
SNX13-203ENST00000428135 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
SNX13-203ENST00000428135 ANKRD11Q6UB99 2663 aaPredicted RBP7.58□□□□□ -1.2
SNX13-203ENST00000428135 TLN1Q9Y490 2541 aaKnown RBP7.57□□□□□ -1.2
SNX13-203ENST00000428135 CRLF1O75462 422 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 V9GYV3 84 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 E7EUB6 86 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 OCIAD2Q56VL3 154 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms