RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 D6R8Y8 96 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 IGLV2-11P01706 119 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 AZU1P20160 251 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 SMAGPQ0VAQ4 97 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 UFC1Q9Y3C8 167 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.53□□□□□ -1.363e-8■■■■□ 21.7
SH3D19-204ENST00000427414 USP9XQ93008 2570 aaPredicted RBP6.53□□□□□ -1.36
SH3D19-204ENST00000427414 CHD6Q8TD26 2715 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 HOXA3O43365 443 aaPredicted RBP6.53□□□□□ -1.36
SH3D19-204ENST00000427414 GCSHP23434 173 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 SIGMAR1Q99720 223 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 LENEPQ9Y5L5 61 aa6.53□□□□□ -1.36
SH3D19-204ENST00000427414 ZFYVE26Q68DK2 2539 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 A0A1B0GW15 77 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
SH3D19-204ENST00000427414 LGALS1P09382 135 aaKnown RBP6.52□□□□□ -1.37
SH3D19-204ENST00000427414 GLMPQ8WWB7 406 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 FAM208BQ5VWN6 2430 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 NDUFA7O95182 113 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 HBDP02042 147 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 WFDC3Q8IUB2 231 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 IFI27L1Q96BM0 104 aa6.52□□□□□ -1.37
SH3D19-204ENST00000427414 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 PSG3Q16557 428 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 AMN1Q8IY45 258 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 ORMDL3Q8N138 153 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 TMSB15BA0A087X1C1 80 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 TMEM213A2RRL7 107 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 FXYD2P54710 66 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 GATD1Q8NB37 220 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 DAZ1Q9NQZ3 744 aaKnown RBP6.51□□□□□ -1.37
SH3D19-204ENST00000427414 DKK2Q9UBU2 259 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 SMAD5-AS1Q9Y6J3 95 aa6.51□□□□□ -1.37
SH3D19-204ENST00000427414 NAV3Q8IVL0 2385 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 IGHV7-4-1A0A0J9YVY3 117 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 Q6AWC8 147 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 LYZL1Q6UWQ5 148 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 ZNF493Q6ZR52 646 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 MAPK1IP1LQ8NDC0 245 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 C18orf15Q96N68 181 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 VGLL1Q99990 258 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 PSG8Q9UQ74 426 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 TSSC4Q9Y5U2 329 aaPredicted RBP6.5□□□□□ -1.37
SH3D19-204ENST00000427414 TMEM189A5PLL7 270 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 K7ERJ3 54 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 SCGB1A1P11684 91 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 CRIP1P50238 77 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 OXLD1Q5BKU9 147 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 FAM104BQ5XKR9 115 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 ZNF418Q8TF45 676 aaPredicted RBP6.5□□□□□ -1.37
SH3D19-204ENST00000427414 C17orf77Q96MU5 243 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 TTTY13Q9BZ97 58 aa6.5□□□□□ -1.37
SH3D19-204ENST00000427414 A0A1B0GV72 72 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 GAGE12HA6NDE8 117 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 ZNF207O43670 478 aaKnown RBP6.49□□□□□ -1.37
SH3D19-204ENST00000427414 CT45A10P0DMU9 189 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 CD300EQ496F6 205 aaPredicted RBP6.49□□□□□ -1.37
SH3D19-204ENST00000427414 C4orf3Q8WVX3 66 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 SPXQ9BT56 116 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 SMPXQ9UHP9 88 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 LRBAP50851 2863 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 SMKR1H3BMG3 65 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 J3QR89 54 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 CKS2P33552 79 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 MRPL51Q4U2R6 128 aaKnown RBP6.49□□□□□ -1.37
SH3D19-204ENST00000427414 KLK15Q9H2R5 256 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 NHP2Q9NX24 153 aaKnown RBP6.49□□□□□ -1.37
SH3D19-204ENST00000427414 PLXNB1O43157 2135 aa6.49□□□□□ -1.37
SH3D19-204ENST00000427414 IGKV2D-26A0A0A0MRZ7 120 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 OVOL1O14753 267 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 IGHV3-23P01764 117 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 HILS1P60008 231 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 C9orf47Q6ZRZ4 202 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 Q6ZS46 218 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 CHAC1Q9BUX1 264 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 YAE1D1Q9NRH1 226 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 U3KQK5 164 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 RELNP78509 3460 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 DCHS2Q6V1P9 2916 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 DNAJC9-AS1A6NH13 148 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 WFDC2Q14508 124 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 C8orf49Q96NF6 230 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 S4R3C0 116 aa6.48□□□□□ -1.37
SH3D19-204ENST00000427414 K7EMI3 77 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 M0R3E3 92 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 SOCS3O14543 225 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 NPYP01303 97 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 PRSS1P07477 247 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 A4D1N5 150 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 F8W1H4 67 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 ID1P41134 155 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 TWIST1Q15672 202 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 LINC00477Q96M19 166 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 ODF3Q96PU9 254 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 HIGD1BQ9P298 99 aa6.47□□□□□ -1.37
SH3D19-204ENST00000427414 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.37
SH3D19-204ENST00000427414 ETDBQ3ZM63 59 aa6.46□□□□□ -1.37
SH3D19-204ENST00000427414 Q6ZSV7 163 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms