RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 F6UZH7 168 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 GNRH2O43555 120 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 TYMSP04818 313 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 STAG3L2P0CL84 134 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 STAG3L3P0CL85 134 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 ARL14EPLP0DKL9 152 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 ERVFC1-1P60608 527 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 GNG5P63218 68 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 ALG5Q9Y673 324 aa14.15□□□□□ -0.14
UBXN4-204ENST00000426921 TRAV9-2A0A087WT02 112 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 HMGB3O15347 200 aaKnown RBP14.14□□□□□ -0.15
UBXN4-204ENST00000426921 DNAH10OSP0CZ25 163 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 CDC34P49427 236 aaPredicted RBP14.14□□□□□ -0.15
UBXN4-204ENST00000426921 WFDC10BQ8IUB3 73 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 OR4C5Q8NGB2 326 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 KCNS1Q96KK3 526 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 TXNDC17Q9BRA2 123 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 PSMG3Q9BT73 122 aaPredicted RBP14.14□□□□□ -0.15
UBXN4-204ENST00000426921 SDF2L1Q9HCN8 221 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 PGPEP1Q9NXJ5 209 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 TNFRSF18Q9Y5U5 241 aa14.14□□□□□ -0.15
UBXN4-204ENST00000426921 CDPF1Q6NVV7 123 aa14.13□□□□□ -0.15
UBXN4-204ENST00000426921 C5orf17Q8NAS9 161 aa14.13□□□□□ -0.15
UBXN4-204ENST00000426921 AQP10Q96PS8 301 aa14.13□□□□□ -0.15
UBXN4-204ENST00000426921 TIRAPP58753 221 aa14.12□□□□□ -0.15
UBXN4-204ENST00000426921 ASB13Q8WXK3 278 aa14.12□□□□□ -0.15
UBXN4-204ENST00000426921 EREGO14944 169 aa14.11□□□□□ -0.15
UBXN4-204ENST00000426921 TCRAP04437 139 aa14.11□□□□□ -0.15
UBXN4-204ENST00000426921 GATA1P15976 413 aaPredicted RBP14.11□□□□□ -0.15
UBXN4-204ENST00000426921 SH2D6Q7Z4S9 175 aa14.11□□□□□ -0.15
UBXN4-204ENST00000426921 HSD17B11Q8NBQ5 300 aa14.11□□□□□ -0.15
UBXN4-204ENST00000426921 RAB24Q969Q5 203 aa14.11□□□□□ -0.15
UBXN4-204ENST00000426921 NDFIP1Q9BT67 221 aa14.11□□□□□ -0.15
UBXN4-204ENST00000426921 SCRT2Q9NQ03 307 aa14.11□□□□□ -0.15
UBXN4-204ENST00000426921 EVI2AP22794 236 aa14.1□□□□□ -0.15
UBXN4-204ENST00000426921 ATP6V0CP27449 155 aa14.1□□□□□ -0.15
UBXN4-204ENST00000426921 GCHFRP30047 84 aa14.1□□□□□ -0.15
UBXN4-204ENST00000426921 SERF2P84101 59 aa14.1□□□□□ -0.15
UBXN4-204ENST00000426921 MSRB1Q9NZV6 116 aa14.1□□□□□ -0.15
UBXN4-204ENST00000426921 A0A087WTM6 91 aa14.09□□□□□ -0.15
UBXN4-204ENST00000426921 LOC100131303A0A0U1RQF7 123 aa14.09□□□□□ -0.15
UBXN4-204ENST00000426921 PTTG1O95997 202 aa14.09□□□□□ -0.15
UBXN4-204ENST00000426921 IGLV2-11P01706 119 aa14.09□□□□□ -0.15
UBXN4-204ENST00000426921 MBP02144 154 aa14.09□□□□□ -0.15
UBXN4-204ENST00000426921 SGK494Q96LW2 274 aa14.09□□□□□ -0.15
UBXN4-204ENST00000426921 C11orf21Q9P2W6 132 aa14.09□□□□□ -0.15
UBXN4-204ENST00000426921 GGTLC3B5MD39 225 aa14.08□□□□□ -0.16
UBXN4-204ENST00000426921 ZNF80P51504 273 aaPredicted RBP14.08□□□□□ -0.16
UBXN4-204ENST00000426921 C10orf126Q8N4M7 172 aa14.08□□□□□ -0.16
UBXN4-204ENST00000426921 BATF3Q9NR55 127 aa14.08□□□□□ -0.16
UBXN4-204ENST00000426921 TMEM167BQ9NRX6 74 aa14.08□□□□□ -0.16
UBXN4-204ENST00000426921 FBLL1A6NHQ2 334 aaKnown RBP14.07□□□□□ -0.16
UBXN4-204ENST00000426921 K7EQM0 130 aa14.07□□□□□ -0.16
UBXN4-204ENST00000426921 CIDEAO60543 219 aa14.07□□□□□ -0.16
UBXN4-204ENST00000426921 PFN1P07737 140 aaKnown RBP14.07□□□□□ -0.16
UBXN4-204ENST00000426921 C9orf85Q96MD7 179 aa14.07□□□□□ -0.16
UBXN4-204ENST00000426921 TNFSF18Q9UNG2 199 aa14.07□□□□□ -0.16
UBXN4-204ENST00000426921 PSG8Q9UQ74 426 aa14.07□□□□□ -0.16
UBXN4-204ENST00000426921 TAAR5O14804 337 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 CXorf1O96002 111 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 GCGP01275 180 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 CRYGDP07320 174 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 ZNF876PQ49A33 203 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 CFAP126Q5VTH2 177 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 TMEM75Q8N9X5 138 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 PTH2Q96A98 100 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 MED28Q9H204 178 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 SH3BGRL3Q9H299 93 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 EPDR1Q9UM22 224 aa14.06□□□□□ -0.16
UBXN4-204ENST00000426921 RS1O15537 224 aa14.05□□□□□ -0.16
UBXN4-204ENST00000426921 FLI1Q01543 452 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-204ENST00000426921 DPPA3Q6W0C5 159 aa14.05□□□□□ -0.16
UBXN4-204ENST00000426921 CYB561D1Q8N8Q1 229 aa14.05□□□□□ -0.16
UBXN4-204ENST00000426921 SLC25A29Q8N8R3 303 aa14.05□□□□□ -0.16
UBXN4-204ENST00000426921 NHLRC2Q8NBF2 726 aa14.05□□□□□ -0.16
UBXN4-204ENST00000426921 ACTR3CQ9C0K3 210 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-204ENST00000426921 FAT1Q14517 4588 aa14.04□□□□□ -0.16
UBXN4-204ENST00000426921 TRBV6-4A0A1B0GX49 114 aa14.04□□□□□ -0.16
UBXN4-204ENST00000426921 GIPP09681 153 aaPredicted RBP14.04□□□□□ -0.16
UBXN4-204ENST00000426921 FUSP35637 526 aaKnown RBP eCLIP14.04□□□□□ -0.16
UBXN4-204ENST00000426921 SUMO1P63165 101 aaKnown RBP14.04□□□□□ -0.16
UBXN4-204ENST00000426921 RHOHQ15669 191 aa14.04□□□□□ -0.16
UBXN4-204ENST00000426921 ZFP69Q49AA0 526 aa14.04□□□□□ -0.16
UBXN4-204ENST00000426921 SMUG1Q53HV7 270 aa14.04□□□□□ -0.16
UBXN4-204ENST00000426921 Q5BKY6 102 aa14.04□□□□□ -0.16
UBXN4-204ENST00000426921 LINC01556Q5JQF7 62 aa14.04□□□□□ -0.16
UBXN4-204ENST00000426921 IGHV3-38A0A0C4DH36 116 aa14.03□□□□□ -0.16
UBXN4-204ENST00000426921 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
UBXN4-204ENST00000426921 A0A1W2PRE2 83 aa14.02□□□□□ -0.17
UBXN4-204ENST00000426921 RNF222A6NCQ9 220 aa14.02□□□□□ -0.17
UBXN4-204ENST00000426921 RNASE3P12724 160 aaKnown RBP14.02□□□□□ -0.17
UBXN4-204ENST00000426921 PPT1P50897 306 aa14.02□□□□□ -0.17
UBXN4-204ENST00000426921 XGP55808 180 aa14.02□□□□□ -0.17
UBXN4-204ENST00000426921 SAPCD1Q5SSQ6 148 aa14.02□□□□□ -0.17
UBXN4-204ENST00000426921 PRADC1Q9BSG0 188 aa14.02□□□□□ -0.17
UBXN4-204ENST00000426921 ZNF506Q5JVG8 444 aa14.01□□□□□ -0.17
UBXN4-204ENST00000426921 PRNTQ86SH4 94 aa14.01□□□□□ -0.17
UBXN4-204ENST00000426921 PGPEP1LA6NFU8 196 aa14□□□□□ -0.17
UBXN4-204ENST00000426921 MGST1P10620 155 aaKnown RBP14□□□□□ -0.17
UBXN4-204ENST00000426921 KRTAP10-1P60331 282 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms