RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 Q86TA4 180 aa8.9□□□□□ -0.98
GPC1-204ENST00000426280 ZNF680Q8NEM1 530 aa8.9□□□□□ -0.98
GPC1-204ENST00000426280 PYGO2Q9BRQ0 406 aa8.9□□□□□ -0.98
GPC1-204ENST00000426280 DNAH2Q9P225 4427 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 RTL8CO15255 209 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 BCL2P10415 239 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 UBE2G1P62253 170 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 Q6AWC8 147 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 Q6ZR54 194 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 LYPD6BQ8NI32 183 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 NDFIP1Q9BT67 221 aa8.89□□□□□ -0.99
GPC1-204ENST00000426280 IGHV1OR15-1A0A075B7D0 117 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 RGS13O14921 159 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 NUDT3O95989 172 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 GCGP01275 180 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 IFNA1P01562 189 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
GPC1-204ENST00000426280 TMEM183BQ1AE95 376 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 LINC00467Q9BRT7 94 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 NAGKQ9UJ70 344 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 DNAH17Q9UFH2 4485 aa8.88□□□□□ -0.99
GPC1-204ENST00000426280 NACAE9PAV3 2078 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 A0A0J9YY99 117 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 FBLL1A6NHQ2 334 aaKnown RBP8.87□□□□□ -0.99
GPC1-204ENST00000426280 SNURFLB1AK76 121 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 DAZ2Q13117 558 aaKnown RBP8.87□□□□□ -0.99
GPC1-204ENST00000426280 OR5I1Q13606 314 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 ANXA2RQ3ZCQ2 193 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 SMUG1Q53HV7 270 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 SAPCD1Q5SSQ6 148 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 EIF4E3Q8N5X7 224 aaKnown RBP8.87□□□□□ -0.99
GPC1-204ENST00000426280 NHLRC2Q8NBF2 726 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 C11orf52Q96A22 123 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 FMC1Q96HJ9 113 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 TCEAL7Q9BRU2 100 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 MDFICQ9P1T7 246 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 C11orf21Q9P2W6 132 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 VAX2Q9UIW0 290 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
GPC1-204ENST00000426280 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 TRAV21A0A0B4J279 112 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 TRBV6-1A0A0K0K1D8 114 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 CRIP1P50238 77 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 RNF212Q495C1 297 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 VSIG2Q96IQ7 327 aa8.86□□□□□ -0.99
GPC1-204ENST00000426280 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 MUC4Q99102 2169 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 RAB19A4D1S5 217 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 RBFOX3A6NFN3 312 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 GNRH2O43555 120 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 SPINK4O60575 86 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 LTAP01374 205 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 RPL35P42766 123 aaKnown RBP8.85□□□□□ -0.99
GPC1-204ENST00000426280 TCL1AP56279 114 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 LGALS9BQ3B8N2 356 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 TOR2AQ5JU69 321 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 FAM159AQ6UWV7 190 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 C15orf53Q8NAA6 179 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 TXNDC17Q9BRA2 123 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 MED9Q9NWA0 146 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 MRPL16Q9NX20 251 aaKnown RBP8.85□□□□□ -0.99
GPC1-204ENST00000426280 ZFP30Q9Y2G7 519 aa8.85□□□□□ -0.99
GPC1-204ENST00000426280 TRGV1A0A0A0MS02 117 aa8.84□□□□□ -0.99
GPC1-204ENST00000426280 IGHV3-53P01767 116 aa8.84□□□□□ -0.99
GPC1-204ENST00000426280 ESRGQ1W209 222 aa8.84□□□□□ -0.99
GPC1-204ENST00000426280 ZNF506Q5JVG8 444 aa8.84□□□□□ -0.99
GPC1-204ENST00000426280 BAGE2Q86Y30 109 aa8.84□□□□□ -0.99
GPC1-204ENST00000426280 PDE6DO43924 150 aa8.83□□□□□ -1
GPC1-204ENST00000426280 TYMSP04818 313 aa8.83□□□□□ -1
GPC1-204ENST00000426280 S100A9P06702 114 aaKnown RBP8.83□□□□□ -1
GPC1-204ENST00000426280 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
GPC1-204ENST00000426280 TAGLN2P37802 199 aaKnown RBP8.83□□□□□ -1
GPC1-204ENST00000426280 IFITM2Q01629 132 aa8.83□□□□□ -1
GPC1-204ENST00000426280 FAM210AQ96ND0 272 aa8.83□□□□□ -1
GPC1-204ENST00000426280 IGKV3D-20A0A0C4DH25 116 aa8.82□□□□□ -1
GPC1-204ENST00000426280 PGPEP1LA6NFU8 196 aa8.82□□□□□ -1
GPC1-204ENST00000426280 FABP5P3A8MUU1 101 aa8.82□□□□□ -1
GPC1-204ENST00000426280 SH2D1AO60880 128 aa8.82□□□□□ -1
GPC1-204ENST00000426280 TDRG1Q3Y452 100 aa8.82□□□□□ -1
GPC1-204ENST00000426280 CENPWQ5EE01 88 aa8.82□□□□□ -1
GPC1-204ENST00000426280 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
GPC1-204ENST00000426280 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
GPC1-204ENST00000426280 C18orf15Q96N68 181 aa8.82□□□□□ -1
GPC1-204ENST00000426280 MLST8Q9BVC4 326 aa8.82□□□□□ -1
GPC1-204ENST00000426280 EIF5A2Q9GZV4 153 aaKnown RBP8.82□□□□□ -1
GPC1-204ENST00000426280 TRBV20OR9-2A0A075B6H5 130 aa8.81□□□□□ -1
GPC1-204ENST00000426280 TRGV2A0A075B6R0 118 aa8.81□□□□□ -1
GPC1-204ENST00000426280 A0A096LPF7 62 aa8.81□□□□□ -1
GPC1-204ENST00000426280 IGHV3-16A0A0C4DH30 117 aa8.81□□□□□ -1
GPC1-204ENST00000426280 PRSS29PA6NIE9 313 aa8.81□□□□□ -1
GPC1-204ENST00000426280 M0R036 132 aa8.81□□□□□ -1
GPC1-204ENST00000426280 IGLV2-8P01709 118 aa8.81□□□□□ -1
GPC1-204ENST00000426280 CEBPGP53567 150 aa8.81□□□□□ -1
GPC1-204ENST00000426280 ZNF415Q09FC8 603 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms