RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TYMSP04818 313 aa12.65□□□□□ -0.38
SMARCAL1-205ENST00000425815 FGF8P55075 233 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-205ENST00000425815 UPK3BQ9BT76 320 aa12.65□□□□□ -0.38
SMARCAL1-205ENST00000425815 PAX4O43316 350 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 CRYBA4P53673 196 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 KCNRGQ8N5I3 272 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 PRO0255Q9UI72 69 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 HHLA3Q9XRX5 114 aa12.64□□□□□ -0.39
SMARCAL1-205ENST00000425815 FLI1Q01543 452 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-205ENST00000425815 AKR1C8PQ5T2L2 129 aa12.63□□□□□ -0.39
SMARCAL1-205ENST00000425815 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
SMARCAL1-205ENST00000425815 TMEM75Q8N9X5 138 aa12.63□□□□□ -0.39
SMARCAL1-205ENST00000425815 KRTAP1-5Q9BYS1 174 aa12.63□□□□□ -0.39
SMARCAL1-205ENST00000425815 MRPS16Q9Y3D3 137 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-205ENST00000425815 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
SMARCAL1-205ENST00000425815 FAM74A7A6NL05 159 aa12.62□□□□□ -0.39
SMARCAL1-205ENST00000425815 UBE2G2P60604 165 aa12.62□□□□□ -0.39
SMARCAL1-205ENST00000425815 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
SMARCAL1-205ENST00000425815 HMSDA8MTL9 139 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 K7EQM0 130 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 M0R2P5 195 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 GCGP01275 180 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 FHITP49789 147 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 SLAQ13239 276 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 ZNF345Q14585 488 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 SDF2L1Q9HCN8 221 aa12.61□□□□□ -0.39
SMARCAL1-205ENST00000425815 PFN1P07737 140 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-205ENST00000425815 SOHLH1Q5JUK2 328 aa12.6□□□□□ -0.39
SMARCAL1-205ENST00000425815 C6orf223Q8N319 242 aa12.6□□□□□ -0.39
SMARCAL1-205ENST00000425815 KCNS1Q96KK3 526 aa12.6□□□□□ -0.39
SMARCAL1-205ENST00000425815 ICOSQ9Y6W8 199 aa12.6□□□□□ -0.39
SMARCAL1-205ENST00000425815 MUC4Q99102 2169 aa12.6□□□□□ -0.39
SMARCAL1-205ENST00000425815 MAP1LC3B2A6NCE7 125 aa12.59□□□□□ -0.39
SMARCAL1-205ENST00000425815 TNP2Q05952 138 aa12.59□□□□□ -0.39
SMARCAL1-205ENST00000425815 SMUG1Q53HV7 270 aa12.59□□□□□ -0.39
SMARCAL1-205ENST00000425815 MAP1LC3BQ9GZQ8 125 aa12.59□□□□□ -0.39
SMARCAL1-205ENST00000425815 TRAV4A0A0B4J268 109 aa12.58□□□□□ -0.4
SMARCAL1-205ENST00000425815 TRGV4A0A0C4DH28 118 aa12.58□□□□□ -0.4
SMARCAL1-205ENST00000425815 FBLL1A6NHQ2 334 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-205ENST00000425815 PEX7O00628 323 aa12.58□□□□□ -0.4
SMARCAL1-205ENST00000425815 IFNA7P01567 189 aa12.58□□□□□ -0.4
SMARCAL1-205ENST00000425815 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
SMARCAL1-205ENST00000425815 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
SMARCAL1-205ENST00000425815 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 K7EQD1 137 aa12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 SEC11BP0C7V7 166 aa12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 DPPA3Q6W0C5 159 aa12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 NKX6-2Q9C056 277 aaPredicted RBP12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 ARL2-SNX15V9GYD0 113 aa12.57□□□□□ -0.4
SMARCAL1-205ENST00000425815 A0A0D9SG52 128 aa12.56□□□□□ -0.4
SMARCAL1-205ENST00000425815 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-205ENST00000425815 CRIP1P50238 77 aa12.56□□□□□ -0.4
SMARCAL1-205ENST00000425815 MRPL23Q16540 153 aaKnown RBP12.56□□□□□ -0.4
SMARCAL1-205ENST00000425815 HIST1H2BAQ96A08 127 aa12.56□□□□□ -0.4
SMARCAL1-205ENST00000425815 BCL2L11O43521 198 aa12.55□□□□□ -0.4
SMARCAL1-205ENST00000425815 ZNF575Q86XF7 245 aa12.55□□□□□ -0.4
SMARCAL1-205ENST00000425815 MBD3L1Q8WWY6 194 aa12.55□□□□□ -0.4
SMARCAL1-205ENST00000425815 LOC100131303A0A0U1RQF7 123 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 A0A1W2PPQ1 181 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 PGPEP1LA6NFU8 196 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 C9JCJ5 164 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 RS1O15537 224 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 GYPEP15421 78 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 ZFP69Q49AA0 526 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 NEGR1Q7Z3B1 354 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 COX8CQ7Z4L0 72 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 Q86TA4 180 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 PTH2Q96A98 100 aa12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 ZNF471Q9BX82 626 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-205ENST00000425815 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 NXPH4O95158 308 aa12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 GATA1P15976 413 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 TTC32Q5I0X7 151 aa12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 TMUB2Q71RG4 321 aa12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 RYR1P21817 5038 aa12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 LRP1BQ9NZR2 4599 aa12.53□□□□□ -0.4
SMARCAL1-205ENST00000425815 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.41
SMARCAL1-205ENST00000425815 SIVA1O15304 175 aa12.52□□□□□ -0.41
SMARCAL1-205ENST00000425815 PAGE4O60829 102 aa12.52□□□□□ -0.41
SMARCAL1-205ENST00000425815 PPT1P50897 306 aa12.52□□□□□ -0.41
SMARCAL1-205ENST00000425815 STOML3Q8TAV4 291 aa12.52□□□□□ -0.41
SMARCAL1-205ENST00000425815 SFT2D1Q8WV19 159 aa12.52□□□□□ -0.41
SMARCAL1-205ENST00000425815 ZC2HC1AQ96GY0 325 aa12.52□□□□□ -0.41
SMARCAL1-205ENST00000425815 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
SMARCAL1-205ENST00000425815 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
SMARCAL1-205ENST00000425815 ORM1P02763 201 aa12.51□□□□□ -0.41
SMARCAL1-205ENST00000425815 ZNF506Q5JVG8 444 aa12.51□□□□□ -0.41
SMARCAL1-205ENST00000425815 CST9LP1Q5W188 147 aa12.51□□□□□ -0.41
SMARCAL1-205ENST00000425815 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
SMARCAL1-205ENST00000425815 ZFP30Q9Y2G7 519 aa12.51□□□□□ -0.41
SMARCAL1-205ENST00000425815 SRIP30626 198 aa12.5□□□□□ -0.41
SMARCAL1-205ENST00000425815 IGHV3-73A0A0B4J1V6 119 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms