RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ITLN2Q8WWU7 325 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-205ENST00000425443 SIGLEC8Q9NYZ4 499 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 CUBNO60494 3623 aa10.07□□□□□ -0.8
COL12A1-205ENST00000425443 DOPEY2Q9Y3R5 2298 aa10.06□□□□□ -0.8
COL12A1-205ENST00000425443 ATP6V0E1O15342 81 aa10.06□□□□□ -0.8
COL12A1-205ENST00000425443 GAS8-AS1O95177 125 aa10.06□□□□□ -0.8
COL12A1-205ENST00000425443 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
COL12A1-205ENST00000425443 FABP2P12104 132 aa10.06□□□□□ -0.8
COL12A1-205ENST00000425443 ZNF80P51504 273 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-205ENST00000425443 SRSF2Q01130 221 aaKnown RBP10.06□□□□□ -0.8
COL12A1-205ENST00000425443 MSRB1Q9NZV6 116 aa10.06□□□□□ -0.8
COL12A1-205ENST00000425443 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 C19orf84I3L1E1 186 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 TMEM190Q8WZ59 177 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 C18orf15Q96N68 181 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-205ENST00000425443 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-205ENST00000425443 A0A1W2PPM0 123 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 G3V318 75 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 EGR2P11161 476 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-205ENST00000425443 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 CLEC19AQ6UXS0 136 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 NPFFO15130 113 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 FGF6P10767 208 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 LMO4P61968 165 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 TMEM219Q86XT9 240 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 PRELID3AQ96N28 172 aa10.05□□□□□ -0.8
COL12A1-205ENST00000425443 XGP55808 180 aa10.04□□□□□ -0.8
COL12A1-205ENST00000425443 FAM110DQ8TAY7 271 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-205ENST00000425443 PRSS29PA6NIE9 313 aa10.04□□□□□ -0.8
COL12A1-205ENST00000425443 IGHG4P01861 327 aa10.04□□□□□ -0.8
COL12A1-205ENST00000425443 COX8AP10176 69 aa10.04□□□□□ -0.8
COL12A1-205ENST00000425443 TMEM97Q5BJF2 176 aa10.04□□□□□ -0.8
COL12A1-205ENST00000425443 SMAD5-AS1Q9Y6J3 95 aa10.04□□□□□ -0.8
COL12A1-205ENST00000425443 LINC01548A6NM66 108 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 EDN2P20800 178 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 CKS2P33552 79 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 PAX8Q06710 450 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 CELSR2Q9HCU4 2923 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 PRAC2D3DTV9 90 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 EVI2AP22794 236 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 MRPL51Q4U2R6 128 aaKnown RBP10.03□□□□□ -0.8
COL12A1-205ENST00000425443 Q6AWC8 147 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 DUX5Q96PT3 197 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 PSMG3-AS1Q96PY0 264 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 CSMD2Q7Z408 3487 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 POLQO75417 2590 aa10.03□□□□□ -0.8
COL12A1-205ENST00000425443 FOXI2Q6ZQN5 318 aa10.02□□□□□ -0.8
COL12A1-205ENST00000425443 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.8
COL12A1-205ENST00000425443 H3BRM9 83 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 NHLRC4P0CG21 123 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-205ENST00000425443 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 NRGNQ92686 78 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 PRR25Q96S07 402 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 PRORYQ9H606 182 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 U3KQK5 164 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 F5H768 121 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 NPYP01303 97 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 CACNG7P62955 275 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 EEF1AKMT3Q96AZ1 226 aa10.02□□□□□ -0.81
COL12A1-205ENST00000425443 PIEZO1Q92508 2521 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 CENPVL3A0A0U1RRI6 287 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 A6NDN8 102 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 NMUP48645 174 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 BRD3OSQ6XYD6 125 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 Q6ZUT4 128 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 TEX29Q8N6K0 151 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 ZNF502Q8TBZ5 544 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 ITPR1Q14643 2758 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 IGHV4-39P01824 125 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 ZFAND6Q6FIF0 208 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 FAM208BQ5VWN6 2430 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 PKD1L2Q7Z442 2459 aa10.01□□□□□ -0.81
COL12A1-205ENST00000425443 IGKV3-7A0A075B6H7 116 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 SPRY2O43597 315 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 ORMDL3Q8N138 153 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 GATA1P15976 413 aaPredicted RBP10□□□□□ -0.81
COL12A1-205ENST00000425443 SEC11AP67812 179 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 SAMD5Q5TGI4 173 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 Q6ZQT7 251 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 KIR2DL4Q99706 377 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 FLNCQ14315 2725 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 ACACBO00763 2458 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 SORL1Q92673 2214 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 ZFYVE26Q68DK2 2539 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 TRAV40A0A0B4J280 105 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 IL17RELQ6ZVW7 336 aa10□□□□□ -0.81
COL12A1-205ENST00000425443 MEIG1Q5JSS6 88 aa9.99□□□□□ -0.81
COL12A1-205ENST00000425443 METTL26Q96S19 204 aa9.99□□□□□ -0.81
COL12A1-205ENST00000425443 CCL19Q99731 98 aa9.99□□□□□ -0.81
COL12A1-205ENST00000425443 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
COL12A1-205ENST00000425443 UTP20O75691 2785 aaKnown RBP9.99□□□□□ -0.81
COL12A1-205ENST00000425443 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
COL12A1-205ENST00000425443 DKK2Q9UBU2 259 aa9.99□□□□□ -0.81
COL12A1-205ENST00000425443 WIPF1O43516 503 aa9.98□□□□□ -0.81
COL12A1-205ENST00000425443 LY6EQ16553 131 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms