RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 MGST2Q99735 147 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 NDUFA12Q9UI09 145 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 PTPRSQ13332 1948 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 POLEQ07864 2286 aa2.28□□□□□ -2.05
SF3B1-205ENST00000424674 TDRD6O60522 2096 aaKnown RBP2.27□□□□□ -2.05
SF3B1-205ENST00000424674 CROCCQ5TZA2 2017 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 NYNRINQ9P2P1 1898 aaKnown RBP2.27□□□□□ -2.05
SF3B1-205ENST00000424674 C5orf67F2Z3F1 127 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 PDCD5O14737 125 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 ERC2-IT1O76042 136 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 CCL8P80075 99 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 ADIRFQ15847 76 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 TDRG1Q3Y452 100 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 C2orf82Q6UX34 121 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 ZNF431Q8TF32 576 aaPredicted RBP2.27□□□□□ -2.05
SF3B1-205ENST00000424674 PPDPFLQ8WWR9 84 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 TSLPQ969D9 159 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 SCRT1Q9BWW7 348 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 MRPL35Q9NZE8 188 aaKnown RBP2.27□□□□□ -2.05
SF3B1-205ENST00000424674 GTF3C1Q12789 2109 aa2.27□□□□□ -2.05
SF3B1-205ENST00000424674 POLA1P09884 1462 aaPredicted RBP2.26□□□□□ -2.05
SF3B1-205ENST00000424674 SCAPERQ9BY12 1400 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 SCN1AP35498 2009 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 TRAV10A0A0B4J240 114 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 TCRBV4S1A1TA0A5B7 111 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 NAP1L6A6NFF2 107 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 H3BRM9 83 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 MRPS14O60783 128 aaKnown RBP2.26□□□□□ -2.05
SF3B1-205ENST00000424674 CCKP06307 115 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 FAUP35544 74 aaKnown RBP2.26□□□□□ -2.05
SF3B1-205ENST00000424674 RBM3P98179 157 aaKnown RBP2.26□□□□□ -2.05
SF3B1-205ENST00000424674 DEFA5Q01523 94 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 EIF4EBP1Q13541 118 aaPredicted RBP2.26□□□□□ -2.05
SF3B1-205ENST00000424674 KPRPQ5T749 579 aaPredicted RBP2.26□□□□□ -2.05
SF3B1-205ENST00000424674 MYOZ3Q8TDC0 251 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 S100ZQ8WXG8 99 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 ST20Q9HBF5 79 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 NDUFB11Q9NX14 153 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 KIF25-AS1Q9Y6Z4 181 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 SCN9AQ15858 1988 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 ZNF407Q9C0G0 2248 aa2.26□□□□□ -2.05
SF3B1-205ENST00000424674 ARAP2Q8WZ64 1704 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 MARF1Q9Y4F3 1742 aaKnown RBP2.25□□□□□ -2.05
SF3B1-205ENST00000424674 MYH1P12882 1939 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 hADV29S1A0JD25 119 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 NDUFC1O43677 76 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 SEC11AP67812 179 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 RHOHQ15669 191 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 C9orf116Q5BN46 136 aaPredicted RBP2.25□□□□□ -2.05
SF3B1-205ENST00000424674 LINC00612Q8N6U2 182 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 TRGV9Q99603 122 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 PSORS1C2Q9UIG4 136 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 MEGF6O75095 1541 aa2.25□□□□□ -2.05
SF3B1-205ENST00000424674 HELZP42694 1942 aaKnown RBP2.25□□□□□ -2.05
SF3B1-205ENST00000424674 PRDM15P57071 1507 aaPredicted RBP2.24□□□□□ -2.05
SF3B1-205ENST00000424674 ZFC3H1O60293 1989 aaKnown RBP2.24□□□□□ -2.05
SF3B1-205ENST00000424674 ODF3BA8MYP8 253 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 CXCL8P10145 99 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 UBE2G1P62253 170 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 ERHP84090 104 aaKnown RBP2.24□□□□□ -2.05
SF3B1-205ENST00000424674 MIR22HGQ0VDD5 57 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 ZNF791Q3KP31 576 aaPredicted RBP2.24□□□□□ -2.05
SF3B1-205ENST00000424674 Q5BKY6 102 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 S100A7L2Q5SY68 101 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 SLC48A1Q6P1K1 146 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 C20orf78Q9BR46 151 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 CYTL1Q9NRR1 136 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 KLK12Q9UKR0 248 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 PLA2R1Q13018 1463 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 GREB1Q4ZG55 1949 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 PLXNA3P51805 1871 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 CC2D2AQ9P2K1 1620 aa2.24□□□□□ -2.05
SF3B1-205ENST00000424674 PLXNB1O43157 2135 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 USP54Q70EL1 1684 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 IGLV2-18A0A075B6J9 118 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 IGKV1D-17A0A075B6S4 117 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 TRAV12-1A0A0B4J245 112 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 TRAV40A0A0B4J280 105 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 ASAH2BP0C7U1 165 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 GNG11P61952 73 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 MPV17LQ2QL34 196 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 LINC00483Q53H64 154 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 SERP2Q8N6R1 65 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 FAM213BQ8TBF2 198 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 CACFD1Q9UGQ2 172 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 LHFPL6Q9Y693 200 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 ADAMTS9Q9P2N4 1935 aa2.23□□□□□ -2.05
SF3B1-205ENST00000424674 ABCA3Q99758 1704 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 ROBO1Q9Y6N7 1651 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 PSME4Q14997 1843 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 FANCAO15360 1455 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 PXDNQ92626 1479 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 TMSB15BA0A087X1C1 80 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 TRAV17A0A0B4J275 112 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 TRBV10-3A0A0K0K1G6 114 aa2.22□□□□□ -2.05
SF3B1-205ENST00000424674 RNASE2P10153 161 aaKnown RBP2.22□□□□□ -2.05
SF3B1-205ENST00000424674 MDKP21741 143 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms