RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 CRYBA4P53673 196 aa12.77□□□□□ -0.37
NPC1L1-203ENST00000423141 SCGB3A1Q96QR1 104 aa12.77□□□□□ -0.37
NPC1L1-203ENST00000423141 TRAV12-1A0A0B4J245 112 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 PRSS29PA6NIE9 313 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 SCGB2A2Q13296 93 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 PRADC1Q9BSG0 188 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 RAXQ9Y2V3 346 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 LOC107984156A0A0G2JMH3 177 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 PSMB2P49721 201 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 ARL17AQ8IVW1 177 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 PIP4P1Q86T03 277 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 DLX4Q92988 240 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 VKORC1Q9BQB6 163 aa12.76□□□□□ -0.37
NPC1L1-203ENST00000423141 TRAV8-2A0A0B4J237 113 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 LINC01619G3V211 115 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 TSPAN13O95857 204 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 SPINK8P0C7L1 97 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 OR11H6Q8NGC7 330 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 ZNF815PA8K554 130 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 J3KRW8 73 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 XGP55808 180 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 PRR9Q5T870 116 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 SVIPQ8NHG7 77 aa12.75□□□□□ -0.37
NPC1L1-203ENST00000423141 RBAKDNA6NC62 111 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 C15orf32Q32M92 178 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 KLHL30-AS1Q8NEE0 82 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 IGF1P05019 195 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 CLEC3BP05452 202 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 SLC25A16P16260 332 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 SCGB1D4Q6XE38 83 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 TOMM6Q96B49 74 aa12.74□□□□□ -0.37
NPC1L1-203ENST00000423141 CLPSL1A2RUU4 121 aa12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 B9A039 149 aa12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 BAALCQ8WXS3 180 aa12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 RASL10AQ92737 203 aa12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 ANKHD1Q8IWZ3 2542 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 M0R381 172 aa12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 CARD19Q96LW7 228 aa12.73□□□□□ -0.37
NPC1L1-203ENST00000423141 IGHV7-81A0A0B4J1V7 117 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 UBE2D1P51668 147 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 SUMO2P61956 95 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 DEFB104AQ8WTQ1 72 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 IGHV4-4A0A075B6R2 117 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 ODF3BA8MYP8 253 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 TGFAP01135 160 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 Q6ZUT4 128 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 ATP6V0E2Q8NHE4 81 aa12.72□□□□□ -0.37
NPC1L1-203ENST00000423141 EMP1P54849 157 aa12.71□□□□□ -0.37
NPC1L1-203ENST00000423141 C2orf66Q6UXQ4 117 aa12.71□□□□□ -0.37
NPC1L1-203ENST00000423141 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.37
NPC1L1-203ENST00000423141 SCGB2A1O75556 95 aa12.71□□□□□ -0.38
NPC1L1-203ENST00000423141 COX6B1P14854 86 aa12.71□□□□□ -0.38
NPC1L1-203ENST00000423141 ECSCRQ19T08 205 aa12.71□□□□□ -0.38
NPC1L1-203ENST00000423141 ORMDL2Q53FV1 153 aa12.71□□□□□ -0.38
NPC1L1-203ENST00000423141 RNF223E7ERA6 249 aa12.7□□□□□ -0.38
NPC1L1-203ENST00000423141 CD7P09564 240 aa12.7□□□□□ -0.38
NPC1L1-203ENST00000423141 UBE2D3P61077 147 aa12.7□□□□□ -0.38
NPC1L1-203ENST00000423141 UBE2D2P62837 147 aa12.7□□□□□ -0.38
NPC1L1-203ENST00000423141 C14orf178Q8N769 122 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-203ENST00000423141 TTC28Q96AY4 2481 aa12.7□□□□□ -0.38
NPC1L1-203ENST00000423141 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 CD3EP07766 207 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 GATA3P23771 443 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 DEFB123Q8N688 67 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 Q8N6K4 173 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 TCL1BO95988 128 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 LINC01560Q8TB33 94 aa12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 HRNRQ86YZ3 2850 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-203ENST00000423141 TMEM238LA0A1B0GVL6 79 aa12.68□□□□□ -0.38
NPC1L1-203ENST00000423141 A6NJY4 79 aa12.68□□□□□ -0.38
NPC1L1-203ENST00000423141 CCDC140Q96MF4 163 aa12.68□□□□□ -0.38
NPC1L1-203ENST00000423141 HIF1ANQ9NWT6 349 aa12.68□□□□□ -0.38
NPC1L1-203ENST00000423141 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
NPC1L1-203ENST00000423141 KIR2DL4Q99706 377 aa12.68□□□□□ -0.38
NPC1L1-203ENST00000423141 DEFB1P60022 68 aa12.67□□□□□ -0.38
NPC1L1-203ENST00000423141 CRYGDP07320 174 aa12.67□□□□□ -0.38
NPC1L1-203ENST00000423141 MGPP08493 103 aa12.67□□□□□ -0.38
NPC1L1-203ENST00000423141 C9orf47Q6ZRZ4 202 aa12.67□□□□□ -0.38
NPC1L1-203ENST00000423141 Q6ZS46 218 aa12.67□□□□□ -0.38
NPC1L1-203ENST00000423141 NDUFA11Q86Y39 141 aa12.67□□□□□ -0.38
NPC1L1-203ENST00000423141 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 PRTN3P24158 256 aa12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 PRR30Q53SZ7 412 aaPredicted RBP12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 TEN1Q86WV5 123 aa12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 RNF183Q96D59 192 aa12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 TLN1Q9Y490 2541 aaKnown RBP12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 C11orf86A6NJI1 115 aa12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 Q8N9W7 124 aa12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 C20orf173Q96LM9 149 aa12.66□□□□□ -0.38
NPC1L1-203ENST00000423141 G3V318 75 aa12.65□□□□□ -0.38
NPC1L1-203ENST00000423141 A0A0J9YY99 117 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms