RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 MRPL35Q9NZE8 188 aaKnown RBP12.04□□□□□ -0.48
CDH1-202ENST00000422392 UFSP1Q6NVU6 142 aa12.03□□□□□ -0.48
CDH1-202ENST00000422392 CSPG4Q6UVK1 2322 aa12.03□□□□□ -0.48
CDH1-202ENST00000422392 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
CDH1-202ENST00000422392 ARL3P36405 182 aa12.03□□□□□ -0.48
CDH1-202ENST00000422392 LCNL1Q6ZST4 164 aa12.03□□□□□ -0.48
CDH1-202ENST00000422392 COL25A1Q9BXS0 654 aaPredicted RBP12.03□□□□□ -0.48
CDH1-202ENST00000422392 M0R381 172 aa12.02□□□□□ -0.48
CDH1-202ENST00000422392 LAGE3Q14657 143 aa12.02□□□□□ -0.48
CDH1-202ENST00000422392 LY6EQ16553 131 aa12.02□□□□□ -0.48
CDH1-202ENST00000422392 GPHB5Q86YW7 130 aa12.02□□□□□ -0.48
CDH1-202ENST00000422392 PIFOQ8TCI5 191 aa12.02□□□□□ -0.48
CDH1-202ENST00000422392 GLMPQ8WWB7 406 aa12.02□□□□□ -0.48
CDH1-202ENST00000422392 KLK15Q9H2R5 256 aa12.02□□□□□ -0.48
CDH1-202ENST00000422392 F6UB75 175 aa12.02□□□□□ -0.49
CDH1-202ENST00000422392 K7ERJ3 54 aa12.02□□□□□ -0.49
CDH1-202ENST00000422392 FLNCQ14315 2725 aa12.02□□□□□ -0.49
CDH1-202ENST00000422392 DPM2O94777 84 aa12.01□□□□□ -0.49
CDH1-202ENST00000422392 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
CDH1-202ENST00000422392 MUC4Q99102 2169 aa12.01□□□□□ -0.49
CDH1-202ENST00000422392 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
CDH1-202ENST00000422392 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
CDH1-202ENST00000422392 MRPL53Q96EL3 112 aaKnown RBP12.01□□□□□ -0.49
CDH1-202ENST00000422392 CHAC1Q9BUX1 264 aa12.01□□□□□ -0.49
CDH1-202ENST00000422392 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
CDH1-202ENST00000422392 K7EP34 96 aa12□□□□□ -0.49
CDH1-202ENST00000422392 IGHV4-39P01824 125 aa12□□□□□ -0.49
CDH1-202ENST00000422392 GTF2H5Q6ZYL4 71 aa12□□□□□ -0.49
CDH1-202ENST00000422392 MAPKAPK5-AS1Q8N8E1 139 aa12□□□□□ -0.49
CDH1-202ENST00000422392 ITLN2Q8WWU7 325 aaPredicted RBP12□□□□□ -0.49
CDH1-202ENST00000422392 CFAP46Q8IYW2 2715 aa12□□□□□ -0.49
CDH1-202ENST00000422392 ATP5LO75964 103 aa11.99□□□□□ -0.49
CDH1-202ENST00000422392 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
CDH1-202ENST00000422392 ZFAND2AQ8N6M9 145 aa11.99□□□□□ -0.49
CDH1-202ENST00000422392 HIF1ANQ9NWT6 349 aa11.99□□□□□ -0.49
CDH1-202ENST00000422392 A0A1W2PPM0 123 aa11.98□□□□□ -0.49
CDH1-202ENST00000422392 IGHV4-38-2P0DP08 117 aa11.98□□□□□ -0.49
CDH1-202ENST00000422392 Q6ZS46 218 aa11.98□□□□□ -0.49
CDH1-202ENST00000422392 C9orf139Q6ZV77 190 aa11.98□□□□□ -0.49
CDH1-202ENST00000422392 C14orf178Q8N769 122 aaPredicted RBP11.98□□□□□ -0.49
CDH1-202ENST00000422392 RPL39LQ96EH5 51 aaKnown RBP11.98□□□□□ -0.49
CDH1-202ENST00000422392 SPCS1Q9Y6A9 102 aa11.98□□□□□ -0.49
CDH1-202ENST00000422392 ZANQ9Y493 2812 aa11.98□□□□□ -0.49
CDH1-202ENST00000422392 DEFB104AQ8WTQ1 72 aa11.98□□□□□ -0.49
CDH1-202ENST00000422392 IGHV4-4A0A075B6R2 117 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 FAM223BA6NKX1 122 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 SRD5A1P18405 259 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
CDH1-202ENST00000422392 SRSF1Q07955 248 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDH1-202ENST00000422392 FAM223AQ8IWN6 122 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 DOPEY2Q9Y3R5 2298 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 SORL1Q92673 2214 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 SMIM13P0DJ93 91 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 ANXA2RQ3ZCQ2 193 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 SMIM2Q9BVW6 85 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 MEGF9Q9H1U4 602 aa11.97□□□□□ -0.49
CDH1-202ENST00000422392 NHP2Q9NX24 153 aaKnown RBP11.97□□□□□ -0.49
CDH1-202ENST00000422392 IGHV1-69DA0A0B4J2H0 117 aa11.96□□□□□ -0.49
CDH1-202ENST00000422392 IGHV4-61A0A0C4DH41 118 aa11.96□□□□□ -0.49
CDH1-202ENST00000422392 GNRH2O43555 120 aa11.96□□□□□ -0.49
CDH1-202ENST00000422392 IGHV1-69P01742 117 aa11.96□□□□□ -0.49
CDH1-202ENST00000422392 EDN2P20800 178 aa11.96□□□□□ -0.49
CDH1-202ENST00000422392 RNASE4P34096 147 aaKnown RBP11.96□□□□□ -0.49
CDH1-202ENST00000422392 A0A087WX48 190 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 PRSS47A8MTI9 375 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 BLCAPP62952 87 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 SAMD5Q5TGI4 173 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 OR10J6PQ8NGY7 276 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 RASL10AQ92737 203 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 HIGD1BQ9P298 99 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 SMPXQ9UHP9 88 aa11.96□□□□□ -0.5
CDH1-202ENST00000422392 K7ERU9 68 aa11.95□□□□□ -0.5
CDH1-202ENST00000422392 SOCS3O14543 225 aa11.95□□□□□ -0.5
CDH1-202ENST00000422392 MGPP08493 103 aa11.95□□□□□ -0.5
CDH1-202ENST00000422392 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
CDH1-202ENST00000422392 PHLDA3Q9Y5J5 127 aa11.95□□□□□ -0.5
CDH1-202ENST00000422392 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.94□□□□□ -0.5
CDH1-202ENST00000422392 H3BUX3 64 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 PF4V1P10720 104 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 GNLYP22749 145 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 LINC00477Q96M19 166 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 TRAV21A0A0B4J279 112 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 SUMO2P61956 95 aaKnown RBP11.94□□□□□ -0.5
CDH1-202ENST00000422392 NEGR1Q7Z3B1 354 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 CEND1Q8N111 149 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 MRAP2Q96G30 205 aa11.94□□□□□ -0.5
CDH1-202ENST00000422392 NDUFA4O00483 81 aa11.93□□□□□ -0.5
CDH1-202ENST00000422392 FABP2P12104 132 aa11.93□□□□□ -0.5
CDH1-202ENST00000422392 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
CDH1-202ENST00000422392 CENPEQ02224 2701 aa11.93□□□□□ -0.5
CDH1-202ENST00000422392 ASIPP42127 132 aa11.93□□□□□ -0.5
CDH1-202ENST00000422392 RIPPLY3P57055 190 aa11.92□□□□□ -0.5
CDH1-202ENST00000422392 PHLDA1Q8WV24 401 aaPredicted RBP11.92□□□□□ -0.5
CDH1-202ENST00000422392 SCGB3A1Q96QR1 104 aa11.92□□□□□ -0.5
CDH1-202ENST00000422392 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
CDH1-202ENST00000422392 PKD1L2Q7Z442 2459 aa11.92□□□□□ -0.5
CDH1-202ENST00000422392 DPH3P1Q9H4G8 78 aa11.92□□□□□ -0.5
CDH1-202ENST00000422392 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
CDH1-202ENST00000422392 RNASE3P12724 160 aaKnown RBP11.91□□□□□ -0.5
CDH1-202ENST00000422392 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms