RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
SQSTM1-203ENST00000422245 F6UZH7 168 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 EVI2AP22794 236 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 SH2D6Q7Z4S9 175 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 C10orf126Q8N4M7 172 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 OR10G9Q8NGN4 311 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 OR10G7Q8NGN6 311 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 OR2G3Q8NGZ4 309 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 KCNS1Q96KK3 526 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 NDFIP1Q9BT67 221 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 SCRT2Q9NQ03 307 aa7.86□□□□□ -1.15
SQSTM1-203ENST00000422245 TRAV8-1A0A0A6YYK1 113 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 TYMSP04818 313 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 DNAH10OSP0CZ25 163 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 ARL14EPLP0DKL9 152 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 CDC34P49427 236 aaPredicted RBP7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 TIRAPP58753 221 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 GNG5P63218 68 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 WFDC10BQ8IUB3 73 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 C5orf17Q8NAS9 161 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
SQSTM1-203ENST00000422245 K7EQM0 130 aa7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 GNRH2O43555 120 aa7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 STAG3L2P0CL84 134 aa7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 STAG3L3P0CL85 134 aa7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 ASB13Q8WXK3 278 aa7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 PSMG3Q9BT73 122 aaPredicted RBP7.84□□□□□ -1.15
SQSTM1-203ENST00000422245 A0A087WTM6 91 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 FBLL1A6NHQ2 334 aaKnown RBP7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 MBP02144 154 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 TCRAP04437 139 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 CRYGDP07320 174 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 PPT1P50897 306 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 NHLRC2Q8NBF2 726 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 HSD17B11Q8NBQ5 300 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 TNFRSF18Q9Y5U5 241 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 ALG5Q9Y673 324 aa7.83□□□□□ -1.16
SQSTM1-203ENST00000422245 CIDEAO60543 219 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 GCHFRP30047 84 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 SERF2P84101 59 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 ZFP69Q49AA0 526 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 SUN5Q8TC36 379 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 RAB24Q969Q5 203 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 AQP10Q96PS8 301 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 TMEM167BQ9NRX6 74 aa7.82□□□□□ -1.16
SQSTM1-203ENST00000422245 IGHV3-38A0A0C4DH36 116 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 LOC100131303A0A0U1RQF7 123 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 TAAR5O14804 337 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 PTTG1O95997 202 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 PFN1P07737 140 aaKnown RBP7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 ATP6V0CP27449 155 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 RHOHQ15669 191 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 CYB561D1Q8N8Q1 229 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 PRADC1Q9BSG0 188 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 PSG8Q9UQ74 426 aa7.81□□□□□ -1.16
SQSTM1-203ENST00000422245 TRBV6-4A0A1B0GX49 114 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 GGTLC3B5MD39 225 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 RS1O15537 224 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 CXorf1O96002 111 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 GCGP01275 180 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 FLI1Q01543 452 aaPredicted RBP7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 SMUG1Q53HV7 270 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 LINC01556Q5JQF7 62 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 CFAP126Q5VTH2 177 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 SLC25A29Q8N8R3 303 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 TMEM75Q8N9X5 138 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 PTH2Q96A98 100 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 ACTR3CQ9C0K3 210 aaPredicted RBP7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 MED28Q9H204 178 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 C11orf21Q9P2W6 132 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 EPDR1Q9UM22 224 aa7.8□□□□□ -1.16
SQSTM1-203ENST00000422245 TRAV8-6A0A0B4J262 113 aa7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 EPM2AB3EWF7 344 aa7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 IGLV2-11P01706 119 aa7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 ZNF80P51504 273 aaPredicted RBP7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 SAPCD1Q5SSQ6 148 aa7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 SH3BGRL3Q9H299 93 aa7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 BATF3Q9NR55 127 aa7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 TNFSF18Q9UNG2 199 aa7.79□□□□□ -1.16
SQSTM1-203ENST00000422245 A0A1W2PRE2 83 aa7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 PSCAO43653 123 aa7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 GIPP09681 153 aaPredicted RBP7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 MGST1P10620 155 aaKnown RBP7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 FUSP35637 526 aaKnown RBP eCLIP7.78□□□□□ -1.164e-7■■■□□ 15.3
SQSTM1-203ENST00000422245 SUMO1P63165 101 aaKnown RBP7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 OR10J3Q5JRS4 329 aa7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 ZNF506Q5JVG8 444 aa7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 DPPA3Q6W0C5 159 aa7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 PRNTQ86SH4 94 aa7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 INO80EQ8NBZ0 244 aaPredicted RBP7.78□□□□□ -1.16
SQSTM1-203ENST00000422245 BORCS7-ASMTA0A0B4J1R7 106 aa7.77□□□□□ -1.17
SQSTM1-203ENST00000422245 IBA57-AS1B1ANH7 110 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms