RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 HHLA3Q9XRX5 114 aa10.27□□□□□ -0.77
LINC01840-201ENST00000421870 A0A0D9SG52 128 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 NBDYA0A0U1RRE5 68 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 FAM74A7A6NL05 159 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 CRYBA4P53673 196 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 SAPCD1Q5SSQ6 148 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 UPK3BQ9BT76 320 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 NAGKQ9UJ70 344 aa10.26□□□□□ -0.77
LINC01840-201ENST00000421870 PRSS29PA6NIE9 313 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 PAX4O43316 350 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 TYMSP04818 313 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 SEC11BP0C7V7 166 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 FGF8P55075 233 aaPredicted RBP10.25□□□□□ -0.77
LINC01840-201ENST00000421870 C1orf134Q5TEV5 83 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 Q9H8V8 135 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
LINC01840-201ENST00000421870 M0R2P5 195 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 GCGP01275 180 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 IGHV3-53P01767 116 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 PFN1P07737 140 aaKnown RBP10.24□□□□□ -0.77
LINC01840-201ENST00000421870 UBE2G2P60604 165 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 SMUG1Q53HV7 270 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 HIST1H2BAQ96A08 127 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
LINC01840-201ENST00000421870 MAP1LC3B2A6NCE7 125 aa10.23□□□□□ -0.77
LINC01840-201ENST00000421870 UMAD1C9J7I0 102 aa10.23□□□□□ -0.77
LINC01840-201ENST00000421870 IFNA7P01567 189 aa10.23□□□□□ -0.77
LINC01840-201ENST00000421870 FHITP49789 147 aa10.23□□□□□ -0.77
LINC01840-201ENST00000421870 MBD3L1Q8WWY6 194 aa10.23□□□□□ -0.77
LINC01840-201ENST00000421870 MAP1LC3BQ9GZQ8 125 aa10.23□□□□□ -0.77
LINC01840-201ENST00000421870 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
LINC01840-201ENST00000421870 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
LINC01840-201ENST00000421870 TRAV34A0A0B4J273 112 aa10.22□□□□□ -0.77
LINC01840-201ENST00000421870 PEX7O00628 323 aa10.22□□□□□ -0.77
LINC01840-201ENST00000421870 BCL2L11O43521 198 aa10.22□□□□□ -0.77
LINC01840-201ENST00000421870 COX8CQ7Z4L0 72 aa10.22□□□□□ -0.77
LINC01840-201ENST00000421870 STOML3Q8TAV4 291 aa10.22□□□□□ -0.77
LINC01840-201ENST00000421870 ICOSQ9Y6W8 199 aa10.22□□□□□ -0.77
LINC01840-201ENST00000421870 TRGV4A0A0C4DH28 118 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 KANTRA0A1W2PQU2 76 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 FABP5P3A8MUU1 101 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 SFTA3P0C7M3 94 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 PPT1P50897 306 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.77
LINC01840-201ENST00000421870 ZFP69Q49AA0 526 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 PTH2Q96A98 100 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 ZNF471Q9BX82 626 aaPredicted RBP10.21□□□□□ -0.77
LINC01840-201ENST00000421870 ARL2-SNX15V9GYD0 113 aa10.21□□□□□ -0.77
LINC01840-201ENST00000421870 PKHD1P08F94 4074 aa10.21□□□□□ -0.78
LINC01840-201ENST00000421870 DPPA3Q6W0C5 159 aa10.2□□□□□ -0.78
LINC01840-201ENST00000421870 TMUB2Q71RG4 321 aa10.2□□□□□ -0.78
LINC01840-201ENST00000421870 C6orf223Q8N319 242 aa10.2□□□□□ -0.78
LINC01840-201ENST00000421870 OR4C5Q8NGB2 326 aa10.2□□□□□ -0.78
LINC01840-201ENST00000421870 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
LINC01840-201ENST00000421870 TCEAL7Q9BRU2 100 aa10.2□□□□□ -0.78
LINC01840-201ENST00000421870 ZFP30Q9Y2G7 519 aa10.2□□□□□ -0.78
LINC01840-201ENST00000421870 IGKV3D-20A0A0C4DH25 116 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 A0A1W2PPQ1 181 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 CIDEAO60543 219 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
LINC01840-201ENST00000421870 CRIP1P50238 77 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 EIF5AP63241 154 aaKnown RBP10.19□□□□□ -0.78
LINC01840-201ENST00000421870 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 SFT2D1Q8WV19 159 aa10.19□□□□□ -0.78
LINC01840-201ENST00000421870 K7EQD1 137 aa10.18□□□□□ -0.78
LINC01840-201ENST00000421870 ORM1P02763 201 aa10.18□□□□□ -0.78
LINC01840-201ENST00000421870 LGALSLQ3ZCW2 172 aaPredicted RBP10.18□□□□□ -0.78
LINC01840-201ENST00000421870 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
LINC01840-201ENST00000421870 Q86TA4 180 aa10.18□□□□□ -0.78
LINC01840-201ENST00000421870 FAM213BQ8TBF2 198 aa10.18□□□□□ -0.78
LINC01840-201ENST00000421870 FMC1Q96HJ9 113 aa10.18□□□□□ -0.78
LINC01840-201ENST00000421870 KRTAP1-5Q9BYS1 174 aa10.18□□□□□ -0.78
LINC01840-201ENST00000421870 PGPEP1LA6NFU8 196 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 C9JCJ5 164 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 PAGE4O60829 102 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 TPT1P13693 172 aaKnown RBP10.17□□□□□ -0.78
LINC01840-201ENST00000421870 BTF3P20290 206 aaKnown RBP10.17□□□□□ -0.78
LINC01840-201ENST00000421870 TTC32Q5I0X7 151 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 CST9LP1Q5W188 147 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 Q6ZNX1 250 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 ZNF575Q86XF7 245 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 TCTE3Q8IZS6 198 aa10.17□□□□□ -0.78
LINC01840-201ENST00000421870 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
LINC01840-201ENST00000421870 RS1O15537 224 aa10.16□□□□□ -0.78
LINC01840-201ENST00000421870 PFDN1O60925 122 aa10.16□□□□□ -0.78
LINC01840-201ENST00000421870 H2AFB1P0C5Y9 115 aa10.16□□□□□ -0.78
LINC01840-201ENST00000421870 GYPEP15421 78 aa10.16□□□□□ -0.78
LINC01840-201ENST00000421870 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
LINC01840-201ENST00000421870 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
LINC01840-201ENST00000421870 DNLZQ5SXM8 178 aa10.16□□□□□ -0.78
LINC01840-201ENST00000421870 CFAP126Q5VTH2 177 aa10.16□□□□□ -0.78
LINC01840-201ENST00000421870 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms