RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 TMEM78Q5T7P6 136 aa8.59□□□□□ -1.03
LINC00339-203ENST00000420503 FXYD5Q96DB9 178 aa8.59□□□□□ -1.03
LINC00339-203ENST00000420503 PRELID1Q9Y255 219 aa8.59□□□□□ -1.03
LINC00339-203ENST00000420503 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 ZNF138P52744 262 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 PDE6HQ13956 83 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 Q8N814 137 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 OR11H4Q8NGC9 324 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 OR10G4Q8NGN3 311 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 TMEM70Q9BUB7 260 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 NAGKQ9UJ70 344 aa8.58□□□□□ -1.04
LINC00339-203ENST00000420503 C17orf112F2Z3M2 114 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 GNRH2O43555 120 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 IGHV3-30P01768 117 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 IGHV3-33P01772 117 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 NMBP08949 121 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 IGHV3-30-3P0DP02 117 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 IGHV3-30-5P0DP03 117 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 SLAQ13239 276 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 ZNF266Q14584 549 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 LINC01620Q4KN68 170 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 INO80EQ8NBZ0 244 aaPredicted RBP8.57□□□□□ -1.04
LINC00339-203ENST00000420503 PCNPQ8WW12 178 aaKnown RBP8.57□□□□□ -1.04
LINC00339-203ENST00000420503 RASL10AQ92737 203 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 AAMDCQ9H7C9 122 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 KCNIP2Q9NS61 270 aa8.57□□□□□ -1.04
LINC00339-203ENST00000420503 HMSDA8MTL9 139 aa8.56□□□□□ -1.04
LINC00339-203ENST00000420503 ARPC5O15511 151 aa8.56□□□□□ -1.04
LINC00339-203ENST00000420503 PSCAO43653 123 aa8.56□□□□□ -1.04
LINC00339-203ENST00000420503 NBEAP1P0C6P0 100 aa8.56□□□□□ -1.04
LINC00339-203ENST00000420503 IQCF2Q8IXL9 164 aa8.56□□□□□ -1.04
LINC00339-203ENST00000420503 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 LECT2O14960 151 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 ZNF345Q14585 488 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 TCTE3Q8IZS6 198 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 SCGB1C1Q8TD33 95 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 OR51M1Q9H341 326 aa8.55□□□□□ -1.04
LINC00339-203ENST00000420503 hCG_2014768A0A024R1R8 64 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 TRAV4A0A0B4J268 109 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 A0A1B0GVG6 124 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 IBA57-AS1B1ANH7 110 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 F6UZH7 168 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 ATP6V0CP27449 155 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 PPT1P50897 306 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 RANP62826 216 aaKnown RBP8.54□□□□□ -1.04
LINC00339-203ENST00000420503 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 FFAR4Q5NUL3 377 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 Q6AWC8 147 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 RPL7L1Q6DKI1 246 aaKnown RBP8.54□□□□□ -1.04
LINC00339-203ENST00000420503 DPPA3Q6W0C5 159 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 KCNRGQ8N5I3 272 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 OR4C5Q8NGB2 326 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 OR2G3Q8NGZ4 309 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 NTN5Q8WTR8 489 aaPredicted RBP8.54□□□□□ -1.04
LINC00339-203ENST00000420503 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 PSMG3Q9BT73 122 aaPredicted RBP8.54□□□□□ -1.04
LINC00339-203ENST00000420503 CYTL1Q9NRR1 136 aa8.54□□□□□ -1.04
LINC00339-203ENST00000420503 IGHV3-73A0A0B4J1V6 119 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
LINC00339-203ENST00000420503 C9JCJ5 164 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 TAAR5O14804 337 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 ORM1P02763 201 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 GATA1P15976 413 aaPredicted RBP8.53□□□□□ -1.04
LINC00339-203ENST00000420503 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 HSD17B11Q8NBQ5 300 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 RPH3ALQ9UNE2 315 aa8.53□□□□□ -1.04
LINC00339-203ENST00000420503 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.05
LINC00339-203ENST00000420503 TYMSP04818 313 aa8.52□□□□□ -1.05
LINC00339-203ENST00000420503 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
LINC00339-203ENST00000420503 Q6ZSA8 131 aa8.52□□□□□ -1.05
LINC00339-203ENST00000420503 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
LINC00339-203ENST00000420503 SPXQ9BT56 116 aa8.52□□□□□ -1.05
LINC00339-203ENST00000420503 SH3BGRL3Q9H299 93 aa8.52□□□□□ -1.05
LINC00339-203ENST00000420503 TRGV11A0A075B6L2 103 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 TRAV8-1A0A0A6YYK1 113 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 BORCS7-ASMTA0A0B4J1R7 106 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 A0A0D9SG52 128 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 DIRC3C9JPN6 131 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 K7EP13 123 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 M0R2P5 195 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 OR7C2O60412 319 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 C1QBP02746 253 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 RAB2AP61019 212 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 SERF2P84101 59 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 OR10J3Q5JRS4 329 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 FAM159AQ6UWV7 190 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 HYLS1Q96M11 299 aa8.51□□□□□ -1.05
LINC00339-203ENST00000420503 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
LINC00339-203ENST00000420503 GNG5P63218 68 aa8.5□□□□□ -1.05
LINC00339-203ENST00000420503 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
LINC00339-203ENST00000420503 ACOT6Q3I5F7 207 aaPredicted RBP8.5□□□□□ -1.05
LINC00339-203ENST00000420503 SCXQ7RTU7 201 aa8.5□□□□□ -1.05
LINC00339-203ENST00000420503 AKAP14Q86UN6 197 aa8.5□□□□□ -1.05
LINC00339-203ENST00000420503 SGK494Q96LW2 274 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms