RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 K7EP13 123 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 EREGO14944 169 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 SFTA3P0C7M3 94 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 STAG3L2P0CL84 134 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 STAG3L3P0CL85 134 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 NFE4Q86UQ8 179 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 C5orf17Q8NAS9 161 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 OR4C5Q8NGB2 326 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 ZNF479Q96JC4 524 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 AQP10Q96PS8 301 aa14.63□□□□□ -0.07
PTPN4-202ENST00000420482 K7EQD1 137 aa14.62□□□□□ -0.07
PTPN4-202ENST00000420482 SH2D6Q7Z4S9 175 aa14.62□□□□□ -0.07
PTPN4-202ENST00000420482 TMEM167BQ9NRX6 74 aa14.62□□□□□ -0.07
PTPN4-202ENST00000420482 LY96Q9Y6Y9 160 aa14.62□□□□□ -0.07
PTPN4-202ENST00000420482 LRP1BQ9NZR2 4599 aa14.61□□□□□ -0.07
PTPN4-202ENST00000420482 TRAV8-1A0A0A6YYK1 113 aa14.61□□□□□ -0.07
PTPN4-202ENST00000420482 F6UZH7 168 aa14.61□□□□□ -0.07
PTPN4-202ENST00000420482 GYPEP15421 78 aa14.61□□□□□ -0.07
PTPN4-202ENST00000420482 ZFP69Q49AA0 526 aa14.61□□□□□ -0.07
PTPN4-202ENST00000420482 INO80EQ8NBZ0 244 aaPredicted RBP14.61□□□□□ -0.07
PTPN4-202ENST00000420482 RAB24Q969Q5 203 aa14.61□□□□□ -0.07
PTPN4-202ENST00000420482 IGHV3-16A0A0C4DH30 117 aa14.6□□□□□ -0.07
PTPN4-202ENST00000420482 GNRH2O43555 120 aa14.6□□□□□ -0.07
PTPN4-202ENST00000420482 CXorf1O96002 111 aa14.6□□□□□ -0.07
PTPN4-202ENST00000420482 ATP6V0CP27449 155 aa14.6□□□□□ -0.07
PTPN4-202ENST00000420482 GNG5P63218 68 aa14.6□□□□□ -0.07
PTPN4-202ENST00000420482 ACTR3CQ9C0K3 210 aaPredicted RBP14.6□□□□□ -0.07
PTPN4-202ENST00000420482 FBLL1A6NHQ2 334 aaKnown RBP14.59□□□□□ -0.07
PTPN4-202ENST00000420482 TAAR5O14804 337 aa14.59□□□□□ -0.07
PTPN4-202ENST00000420482 TCRAP04437 139 aa14.59□□□□□ -0.07
PTPN4-202ENST00000420482 TYMSP04818 313 aa14.59□□□□□ -0.07
PTPN4-202ENST00000420482 EVI2AP22794 236 aa14.59□□□□□ -0.07
PTPN4-202ENST00000420482 GCHFRP30047 84 aa14.59□□□□□ -0.07
PTPN4-202ENST00000420482 TNFSF18Q9UNG2 199 aa14.59□□□□□ -0.07
PTPN4-202ENST00000420482 BORCS7-ASMTA0A0B4J1R7 106 aa14.58□□□□□ -0.08
PTPN4-202ENST00000420482 CIDEAO60543 219 aa14.58□□□□□ -0.08
PTPN4-202ENST00000420482 GIPP09681 153 aaPredicted RBP14.58□□□□□ -0.08
PTPN4-202ENST00000420482 ERVFC1-1P60608 527 aa14.58□□□□□ -0.08
PTPN4-202ENST00000420482 MAPKAPK5-AS1Q8N8E1 139 aa14.57□□□□□ -0.08
PTPN4-202ENST00000420482 SUN5Q8TC36 379 aa14.57□□□□□ -0.08
PTPN4-202ENST00000420482 TVP23CQ96ET8 276 aa14.57□□□□□ -0.08
PTPN4-202ENST00000420482 BOLA1Q9Y3E2 137 aa14.57□□□□□ -0.08
PTPN4-202ENST00000420482 SUMO1P63165 101 aaKnown RBP14.56□□□□□ -0.08
PTPN4-202ENST00000420482 SMUG1Q53HV7 270 aa14.56□□□□□ -0.08
PTPN4-202ENST00000420482 CYB561D1Q8N8Q1 229 aa14.56□□□□□ -0.08
PTPN4-202ENST00000420482 SGK494Q96LW2 274 aa14.56□□□□□ -0.08
PTPN4-202ENST00000420482 PSG8Q9UQ74 426 aa14.56□□□□□ -0.08
PTPN4-202ENST00000420482 GCGP01275 180 aa14.55□□□□□ -0.08
PTPN4-202ENST00000420482 PFN1P07737 140 aaKnown RBP14.55□□□□□ -0.08
PTPN4-202ENST00000420482 FLI1Q01543 452 aaPredicted RBP14.55□□□□□ -0.08
PTPN4-202ENST00000420482 SAPCD1Q5SSQ6 148 aa14.55□□□□□ -0.08
PTPN4-202ENST00000420482 Q6ZRN7 208 aaPredicted RBP14.55□□□□□ -0.08
PTPN4-202ENST00000420482 C10orf126Q8N4M7 172 aa14.55□□□□□ -0.08
PTPN4-202ENST00000420482 NHLRC2Q8NBF2 726 aa14.55□□□□□ -0.08
PTPN4-202ENST00000420482 PGPEP1Q9NXJ5 209 aa14.55□□□□□ -0.08
PTPN4-202ENST00000420482 EPDR1Q9UM22 224 aa14.55□□□□□ -0.08
PTPN4-202ENST00000420482 KRTAP10-2P60368 255 aa14.54□□□□□ -0.08
PTPN4-202ENST00000420482 ZNF876PQ49A33 203 aa14.54□□□□□ -0.08
PTPN4-202ENST00000420482 TMEM75Q8N9X5 138 aa14.54□□□□□ -0.08
PTPN4-202ENST00000420482 PRNTQ86SH4 94 aa14.53□□□□□ -0.08
PTPN4-202ENST00000420482 PRADC1Q9BSG0 188 aa14.53□□□□□ -0.08
PTPN4-202ENST00000420482 SH3BGRL3Q9H299 93 aa14.53□□□□□ -0.08
PTPN4-202ENST00000420482 MSRB1Q9NZV6 116 aa14.53□□□□□ -0.08
PTPN4-202ENST00000420482 FXYD6-FXYD2A0A087WZ82 144 aa14.52□□□□□ -0.09
PTPN4-202ENST00000420482 A0A1W2PRE2 83 aa14.52□□□□□ -0.09
PTPN4-202ENST00000420482 DNAH10OSP0CZ25 163 aa14.52□□□□□ -0.09
PTPN4-202ENST00000420482 GATA1P15976 413 aaPredicted RBP14.52□□□□□ -0.09
PTPN4-202ENST00000420482 PPT1P50897 306 aa14.52□□□□□ -0.09
PTPN4-202ENST00000420482 CDPF1Q6NVV7 123 aa14.52□□□□□ -0.09
PTPN4-202ENST00000420482 WFDC10BQ8IUB3 73 aa14.52□□□□□ -0.09
PTPN4-202ENST00000420482 APOBP04114 4563 aaKnown RBP14.52□□□□□ -0.09
PTPN4-202ENST00000420482 GGTLC3B5MD39 225 aa14.51□□□□□ -0.09
PTPN4-202ENST00000420482 TIRAPP58753 221 aa14.51□□□□□ -0.09
PTPN4-202ENST00000420482 RHOHQ15669 191 aa14.51□□□□□ -0.09
PTPN4-202ENST00000420482 NKX6-2Q9C056 277 aaPredicted RBP14.51□□□□□ -0.09
PTPN4-202ENST00000420482 IFNA7P01567 189 aa14.5□□□□□ -0.09
PTPN4-202ENST00000420482 RPL7L1Q6DKI1 246 aaKnown RBP14.5□□□□□ -0.09
PTPN4-202ENST00000420482 OR2T35Q8NGX2 323 aa14.5□□□□□ -0.09
PTPN4-202ENST00000420482 CTXND1A0A1B0GTU2 59 aa14.49□□□□□ -0.09
PTPN4-202ENST00000420482 TRBV6-4A0A1B0GX49 114 aa14.49□□□□□ -0.09
PTPN4-202ENST00000420482 CRYGDP07320 174 aa14.49□□□□□ -0.09
PTPN4-202ENST00000420482 ZNF80P51504 273 aaPredicted RBP14.49□□□□□ -0.09
PTPN4-202ENST00000420482 Q5BKY6 102 aa14.49□□□□□ -0.09
PTPN4-202ENST00000420482 AKR1C8PQ5T2L2 129 aa14.49□□□□□ -0.09
PTPN4-202ENST00000420482 PTH2Q96A98 100 aa14.49□□□□□ -0.09
PTPN4-202ENST00000420482 TRAV8-6A0A0B4J262 113 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 RNF222A6NCQ9 220 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 RS1O15537 224 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 IGLV2-11P01706 119 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 S100A4P26447 101 aaKnown RBP14.48□□□□□ -0.09
PTPN4-202ENST00000420482 CFAP126Q5VTH2 177 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 SLC25A29Q8N8R3 303 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 C9orf85Q96MD7 179 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 TNFRSF18Q9Y5U5 241 aa14.48□□□□□ -0.09
PTPN4-202ENST00000420482 DNAH5Q8TE73 4624 aa14.47□□□□□ -0.09
PTPN4-202ENST00000420482 IGHV3-38A0A0C4DH36 116 aa14.47□□□□□ -0.09
PTPN4-202ENST00000420482 LOC100131303A0A0U1RQF7 123 aa14.47□□□□□ -0.09
PTPN4-202ENST00000420482 MGST1P10620 155 aaKnown RBP14.47□□□□□ -0.09
PTPN4-202ENST00000420482 Q8N1X5 172 aa14.47□□□□□ -0.09
PTPN4-202ENST00000420482 FABP5P3A8MUU1 101 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms