RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 WI2-2373I1.2A0A1W2PRP0 233 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 TMEM30CPA0ZSE6 113 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 RBAKDNA6NC62 111 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 OOSP1A8MZH6 123 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 K7ENP7 123 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 OVOL1O14753 267 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 TIMM8AO60220 97 aaPredicted RBP2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 TCL1BO95988 128 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 CXCL10P02778 98 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 CLPSP04118 112 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 IFI27P40305 119 aaPredicted RBP2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 ZNF138P52744 262 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 HERVK_113P61574 105 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 ZNF816Q0VGE8 651 aaPredicted RBP2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 EIF4EBP1Q13541 118 aaPredicted RBP2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 EBI3Q14213 229 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 TMEM155Q4W5P6 130 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 FAM27BQ5VT28 67 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 HRCT1Q6UXD1 115 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 Q6ZQT7 251 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 Q86TA4 180 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 LINC00643Q86TS7 51 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 Q8IYB0 196 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 CD177Q8N6Q3 437 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 FLVCR1-AS1Q8TAF5 88 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 PLEKHB2Q96CS7 222 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 SLC25A39Q9BZJ4 359 aaPredicted RBP2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 CALYQ9NYX4 217 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 HHLA3Q9XRX5 114 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 KLF13Q9Y2Y9 288 aaPredicted RBP2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 CUL9Q8IWT3 2517 aa2.47□□□□□ -2.01
SDCBPP3-201ENST00000419629 TMSB15BA0A087X1C1 80 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 TRAV13-1A0A0B4J241 112 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 TRAV12-1A0A0B4J245 112 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 TRAV17A0A0B4J275 112 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 A0A0B4J2C4 111 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 A0A0J9YW62 118 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 C5orf63A6NC05 138 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 PGPA6NDG6 321 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 D6R8Y8 96 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 H0YIG0 161 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 J3QT63 122 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 COX7A2P2O60397 106 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 NDUFC2O95298 119 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 IGKV3-11P04433 115 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 COX6A1P12074 109 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 MYCNOSP40205 109 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 SUB1P53999 127 aaKnown RBP eCLIP2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 KLRB1Q12918 225 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 ZNF56Q15929 161 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 CCL14Q16627 93 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 LINC01620Q4KN68 170 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 C6orf226Q5I0X4 101 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 DEFB121Q5J5C9 76 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 C10orf113Q5VZT2 155 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 FAM104BQ5XKR9 115 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 SCGB1D4Q6XE38 83 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 GOLT1AQ6ZVE7 132 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 NDUFA11Q86Y39 141 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 NFAM1Q8NET5 270 aaPredicted RBP2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 RFESDQ8TAC1 157 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 DPH3Q96FX2 82 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 FOXC2Q99958 501 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 DYNLRB1Q9NP97 96 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 OTORQ9NRC9 128 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 PRO1854Q9UHT4 67 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 FOXA2Q9Y261 457 aaPredicted RBP2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 KIAA1549LQ6ZVL6 1849 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 HEATR5BQ9P2D3 2071 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 HCFC1P51610 2035 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 DOCK3Q8IZD9 2030 aa2.46□□□□□ -2.02
SDCBPP3-201ENST00000419629 EML5Q05BV3 1969 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 A0A0C4DFX4 3053 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 IGLV3-32A0A0A0MS00 114 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 ZNF815PA8K554 130 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 C17orf98A8MV24 154 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 F8VRH5 84 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 H7C1H1 209 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 K7EM74 188 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 K7EMI3 77 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 CDX4O14627 284 aaPredicted RBP2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 MRPS12O15235 138 aaKnown RBP2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 ENSAO43768 121 aaKnown RBP2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 TCRAP04437 139 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 COX6CP09669 75 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 ARMS2P0C7Q2 107 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 SLC25A16P16260 332 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 PSMB8P28062 276 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 CKS2P33552 79 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 PFN2P35080 140 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 LEPP41159 167 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 CCL11P51671 97 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 RPS21P63220 83 aaKnown RBP2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 PLGLAQ15195 96 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 RSPO1Q2MKA7 263 aaPredicted RBP2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 SPINK9Q5DT21 86 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 C1orf195Q5TG92 126 aa2.45□□□□□ -2.02
SDCBPP3-201ENST00000419629 Q5XG85 94 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms