RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 HLA-DRB4X5D2U9 266 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 IGHV3-38A0A0C4DH36 116 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 CGB7P0DN87 165 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 A0A087X0K7 114 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 ANGP03950 147 aaKnown RBP6.62□□□□□ -1.35
UBR4-206ENST00000419533 BLCAPP62952 87 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 Q6ZSR3 168 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 C5orf56Q8N8D9 126 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 BBC3Q96PG8 261 aaPredicted RBP6.62□□□□□ -1.35
UBR4-206ENST00000419533 C16orf74Q96GX8 76 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 LOXL1Q08397 574 aaPredicted RBP6.61□□□□□ -1.35
UBR4-206ENST00000419533 AJUBAQ96IF1 538 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 TNRC6BQ9UPQ9 1833 aaKnown RBP6.61□□□□□ -1.35
UBR4-206ENST00000419533 PRR20EP86478 221 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 PRR20CP86479 221 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 PRR20DP86480 221 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 PRR20BP86481 221 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 PRR20AP86496 221 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 MRPL51Q4U2R6 128 aaKnown RBP6.61□□□□□ -1.35
UBR4-206ENST00000419533 NAA38Q9BRA0 125 aaKnown RBP6.61□□□□□ -1.35
UBR4-206ENST00000419533 SPART-AS1P0CW21 52 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 IGLC2P0DOY2 106 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 IGLC3P0DOY3 106 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 LYPD6BQ8NI32 183 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 WIPF2Q8TF74 440 aaPredicted RBP6.61□□□□□ -1.35
UBR4-206ENST00000419533 ZC2HC1AQ96GY0 325 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 U3KQE9 123 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 ROS1P08922 2347 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 PKDREJQ9NTG1 2253 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 MED13Q9UHV7 2174 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 FAM208BQ5VWN6 2430 aa6.61□□□□□ -1.35
UBR4-206ENST00000419533 A0A096LPF7 62 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 SH2D6Q7Z4S9 175 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 CYYR1Q96J86 154 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 FGF23Q9GZV9 251 aaPredicted RBP6.6□□□□□ -1.35
UBR4-206ENST00000419533 KIAA2026Q5HYC2 2103 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 IGLV11-55A0A075B6I3 123 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 ZNF493Q6ZR52 646 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 VWC2LB2RUY7 222 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 ZNF726P1Q15940 193 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 Q8N9W7 124 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 C20orf78Q9BR46 151 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 TRAV25A0A0B4J276 109 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 ZFP36P26651 326 aaKnown RBP6.6□□□□□ -1.35
UBR4-206ENST00000419533 KIR3DS1Q14943 382 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 Q6ZWC4 215 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 GTF3C1Q12789 2109 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 A0A0J9YY99 117 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 HERVK_113P63121 156 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 MAJINQ3KP22 176 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 C4orf3Q8WVX3 66 aa6.6□□□□□ -1.35
UBR4-206ENST00000419533 TRAV26-2A0A0B4J265 109 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 SMIM27A0A1W2PRY6 76 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 APRG1Q8IVJ8 170 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 DYNAPQ8N1N2 210 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 IGFBPL1Q8WX77 278 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 GTSF1LQ9H1H1 148 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 F6UB75 175 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 I3L2K1 104 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 LTAP01374 205 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 ATP5G1P05496 136 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 CCL18P55774 89 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 C11orf52Q96A22 123 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 AGPAT4-IT1Q9H0P7 198 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 ICOSQ9Y6W8 199 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 IGKV2D-24A0A075B6R9 120 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 PFN2P35080 140 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 IL15RAQ13261 267 aa6.59□□□□□ -1.35
UBR4-206ENST00000419533 ZNF625Q96I27 306 aaPredicted RBP6.59□□□□□ -1.36
UBR4-206ENST00000419533 ZNF48Q96MX3 618 aaPredicted RBP6.59□□□□□ -1.36
UBR4-206ENST00000419533 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.36
UBR4-206ENST00000419533 TMEM126AQ9H061 195 aa6.59□□□□□ -1.36
UBR4-206ENST00000419533 SIRPDQ9H106 197 aa6.59□□□□□ -1.36
UBR4-206ENST00000419533 IGHV4OR15-8A0A075B7B6 117 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 A0A087WW49 117 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 PRSS29PA6NIE9 313 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 WISP2O76076 250 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 MRPL23Q16540 153 aaKnown RBP6.58□□□□□ -1.36
UBR4-206ENST00000419533 V9GYV3 84 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 K7EMT4 169 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 INSL3P51460 131 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 KLF5Q13887 457 aaPredicted RBP6.58□□□□□ -1.36
UBR4-206ENST00000419533 IGF2RP11717 2491 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 IGKV1OR2-108A0A075B7D4 117 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 C18orf32Q8TCD1 76 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 K7EIM0 57 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 CDPF1Q6NVV7 123 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 C16orf54Q6UWD8 224 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 C2orf82Q6UX34 121 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 Q8N7P7 452 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 DOCK7Q96N67 2140 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 HEATR5AQ86XA9 2040 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 WIPF3A6NGB9 483 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 ZFAND6Q6FIF0 208 aa6.58□□□□□ -1.36
UBR4-206ENST00000419533 IGHG2P01859 326 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 HLA-DMBP28068 263 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 C17orf77Q96MU5 243 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 GNRH2O43555 120 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 GAGE2EQ4V326 116 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms