RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 IGHV3-13P01766 116 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 HLA-DQA1P01909 254 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 CCL3P10147 92 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 GLRXP35754 106 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 TSPO2Q5TGU0 170 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 RPP25LQ8N5L8 163 aaKnown RBP3.66□□□□□ -1.82
VPS13A-207ENST00000419472 OR4C12Q96R67 309 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 TNFRSF19Q9NS68 423 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 RABAC1Q9UI14 185 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 ICE1Q9Y2F5 2266 aa3.66□□□□□ -1.82
VPS13A-207ENST00000419472 BSNQ9UPA5 3926 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 TRAV36DV7A0A075B6V5 113 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 CTXND1A0A1B0GTU2 59 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 C11orf94C9JXX5 98 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 ANGPTL7O43827 346 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 ZNF695Q8IW36 515 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 OR4X2Q8NGF9 303 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 CCL17Q92583 94 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 C18orf15Q96N68 181 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 LINC01587Q99440 93 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 MOB4Q9Y3A3 225 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 TIMM9Q9Y5J7 89 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 HILPDAQ9Y5L2 63 aa3.65□□□□□ -1.82
VPS13A-207ENST00000419472 NBEAL1Q6ZS30 2694 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 PLAC8L1A1L4L8 177 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 OR7C1O76099 320 aaPredicted RBP3.65□□□□□ -1.83
VPS13A-207ENST00000419472 APOMO95445 188 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 IGKV1D-33P01593 117 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 IGKV1-33P01594 117 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 APCSP02743 223 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 GIG44P09565 113 aaPredicted RBP3.65□□□□□ -1.83
VPS13A-207ENST00000419472 IFITM1P13164 125 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 G6PCP35575 357 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 SYNJ2BPP57105 145 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 NMSQ5H8A3 153 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 MEIG1Q5JSS6 88 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 SPINK14Q6IE38 97 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 Q6Q795 121 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 DRAM1Q8N682 238 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 ZNF525Q8N782 197 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 OTOSQ8NHW6 89 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 ARHGAP5-AS1Q96IT6 56 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 KCNIP2Q9NS61 270 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 LY96Q9Y6Y9 160 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 SVEP1Q4LDE5 3571 aa3.65□□□□□ -1.83
VPS13A-207ENST00000419472 NCOA6Q14686 2063 aaPredicted RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 IGHV1-45A0A0A0MS14 117 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 PSPHP1O15172 72 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 SRSF10O75494 262 aaKnown RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 IFI6P09912 130 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 COX6A1P12074 109 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 RPL7P18124 248 aaKnown RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 ABCA11PQ4W5N1 156 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 C1orf195Q5TG92 126 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 ZNF497Q6ZNH5 498 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 RPS19BP1Q86WX3 136 aaKnown RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 H1FXQ92522 213 aaKnown RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 PRELID3AQ96N28 172 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 MDFICQ9P1T7 246 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 MPC1Q9Y5U8 109 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 SOX21Q9Y651 276 aaPredicted RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 CHCHD2Q9Y6H1 151 aaPredicted RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 V9GYV3 84 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 POLEQ07864 2286 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 A0A087WYN8 130 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 A0A1W2PQD3 144 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 NAPSAO96009 420 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 MYO7BQ6PIF6 2116 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 IGFL3Q6UXB1 125 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 C1orf147Q96MC9 270 aaPredicted RBP3.64□□□□□ -1.83
VPS13A-207ENST00000419472 INSIG2Q9Y5U4 225 aa3.64□□□□□ -1.83
VPS13A-207ENST00000419472 A0A1B0GX51 115 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 H3BMG7 143 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 H7C423 109 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 SLC25A5P05141 298 aaKnown RBP3.63□□□□□ -1.83
VPS13A-207ENST00000419472 LINC00694P0DN24 101 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 RPS28P62857 69 aaKnown RBP3.63□□□□□ -1.83
VPS13A-207ENST00000419472 LINC01545Q5VT33 79 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 RASL11AQ6T310 242 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 OR13C6PQ8NH95 151 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 IMMP1LQ96LU5 166 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TIMM17AQ99595 171 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TXNDC17Q9BRA2 123 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 PAXXQ9BUH6 204 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 MRPL32Q9BYC8 188 aaKnown RBP3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TNRC6AQ8NDV7 1962 aaKnown RBP3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TRBV20-1A0A075B6N2 111 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 LOC107986453A0A1B0GWG9 222 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 PDCD6O75340 191 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 ZNF823P16415 610 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 DEFB109BQ30KR1 87 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TMEM101Q96IK0 257 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 CYYR1Q96J86 154 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TMEM222Q9H0R3 208 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 ENY2Q9NPA8 101 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 R4GMQ9 66 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TACC2O95359 2948 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms