RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SIGLEC15Q6ZMC9 328 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 ATP5L2Q7Z4Y8 100 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 NUP35Q8NFH5 326 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 OR5C1Q8NGR4 320 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 BAALCQ8WXS3 180 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 C18orf15Q96N68 181 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 FAM103A1Q9BTL3 118 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 OSTCQ9NRP0 149 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 FOXA2Q9Y261 457 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 TP53TG1Q9Y2A0 90 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 DOCK11Q5JSL3 2073 aa4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 HEATR1Q9H583 2144 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-206ENST00000417628 IGHV1-69DA0A0B4J2H0 117 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 LOC107986453A0A1B0GWG9 222 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 TMEM14DPA8MWL7 114 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 F2Z2F3 143 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 IGHV1-69P01742 117 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 KLK1P06870 262 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 IFI6P09912 130 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 LINC00694P0DN24 101 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 CRYGAP11844 174 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 CPMP14384 443 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 NKX2-1P43699 371 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 WFDC2Q14508 124 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 RRN3P1Q2M238 152 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 NMSQ5H8A3 153 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 LCN12Q6JVE5 192 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 C1orf158Q8N1D5 194 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 GAPTQ8N292 157 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 OR10AC1Q8NH08 325 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 ARPC1AQ92747 370 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 ADAT3Q96EY9 351 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 DCTN5Q9BTE1 182 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 TMEM59Q9BXS4 323 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 SIRPDQ9H106 197 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 FZR1Q9UM11 496 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 KCNE3Q9Y6H6 103 aa4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 HUWE1Q7Z6Z7 4374 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-206ENST00000417628 TRAV24A0A0B4J272 114 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 TEX50A0A1B0GTY4 177 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 A0A1B0GV50 99 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 hDV102S1A0JD36 115 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 PPYP01298 95 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 RBP4P02753 201 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 DYNLT3P51808 116 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 HBG1P69891 147 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 HBG2P69892 147 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 EBI3Q14213 229 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 LGALS9BQ3B8N2 356 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 LINC01590Q5TEZ4 76 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 LGALS9CQ6DKI2 356 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 OR4C11Q6IEV9 310 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 TCF23Q7RTU1 214 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 ZNF575Q86XF7 245 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 MMD2Q8IY49 270 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 LRRC29Q8WV35 223 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 DLX4Q92988 240 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 UBE2E3Q969T4 207 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 PRSS27Q9BQR3 290 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 PBOV1Q9GZY1 135 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 FBXL15Q9H469 300 aa4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 ZNF256Q9Y2P7 627 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-206ENST00000417628 TRBV20-1A0A075B6N2 111 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 A0A0A6YYD5 115 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 A0A0U1RRA0 63 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 C3orf85A0A1B0GTC6 90 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 IGLL5B9A064 214 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 NDUFC2-KCTD14E9PQ53 114 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 NDUFB2O95178 105 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 LEPROTL1O95214 131 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 IGLC6P0CF74 106 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 VPREB1P12018 145 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 BRWD1-AS2P59051 145 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 RPL30P62888 115 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 C1orf140Q5VVS0 124 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 SLC22A24Q8N4F4 322 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 GATD1Q8NB37 220 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 NMNAT3Q96T66 252 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 C11orf21Q9P2W6 132 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 B9D1Q9UPM9 204 aa4.18□□□□□ -1.74
ECHDC1-206ENST00000417628 TMED7-TICAM2A0A0A6YYA0 188 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 SMIM27A0A1W2PRY6 76 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 TCRBV4S1A1TA0A5B7 111 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 C11orf94C9JXX5 98 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 ENSAO43768 121 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 CHST1O43916 411 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 EFNA2O43921 213 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 ATP5LO75964 103 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 LYPD3O95274 346 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 INAFM2P0DMQ5 153 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 P0DMU3 169 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 FAM231AP0DMU4 169 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 FAM231CP0DMU5 169 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 BCL3P20749 454 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 PSMB8P28062 276 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 HLA-DMBP28068 263 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms