RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 THAP6Q8TBB0 222 aa10.2□□□□□ -0.78
DDX56-202ENST00000415758 SEC22CQ9BRL7 303 aa10.2□□□□□ -0.78
DDX56-202ENST00000415758 HMCN2Q8NDA2 5059 aa10.2□□□□□ -0.78
DDX56-202ENST00000415758 LYRM1O43325 122 aa10.19□□□□□ -0.78
DDX56-202ENST00000415758 WFDC2Q14508 124 aa10.19□□□□□ -0.78
DDX56-202ENST00000415758 OR5C1Q8NGR4 320 aa10.19□□□□□ -0.78
DDX56-202ENST00000415758 KCNIP2Q9NS61 270 aa10.19□□□□□ -0.78
DDX56-202ENST00000415758 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
DDX56-202ENST00000415758 TRAV6A0A075B6T7 132 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 FBLL1A6NHQ2 334 aaKnown RBP10.18□□□□□ -0.78
DDX56-202ENST00000415758 OR7C2O60412 319 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 IGHV3-30P01768 117 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 IGHV3-33P01772 117 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 TYMSP04818 313 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 IGHV3-30-3P0DP02 117 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 IGHV3-30-5P0DP03 117 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 PRADC1Q9BSG0 188 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 NAGKQ9UJ70 344 aa10.18□□□□□ -0.78
DDX56-202ENST00000415758 TRAV21A0A0B4J279 112 aa10.17□□□□□ -0.78
DDX56-202ENST00000415758 RHOHQ15669 191 aa10.17□□□□□ -0.78
DDX56-202ENST00000415758 KCNS1Q96KK3 526 aa10.17□□□□□ -0.78
DDX56-202ENST00000415758 WDR61Q9GZS3 305 aaKnown RBP10.17□□□□□ -0.78
DDX56-202ENST00000415758 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
DDX56-202ENST00000415758 NUDT15Q9NV35 164 aa10.17□□□□□ -0.78
DDX56-202ENST00000415758 RS1O15537 224 aa10.16□□□□□ -0.78
DDX56-202ENST00000415758 KRTAP10-4P60372 401 aaPredicted RBP10.16□□□□□ -0.78
DDX56-202ENST00000415758 UBE2L3P68036 154 aaKnown RBP10.16□□□□□ -0.78
DDX56-202ENST00000415758 ARL6IP6Q8N6S5 226 aa10.16□□□□□ -0.78
DDX56-202ENST00000415758 SDF2L1Q9HCN8 221 aa10.16□□□□□ -0.78
DDX56-202ENST00000415758 UBR4Q5T4S7 5183 aa10.16□□□□□ -0.78
DDX56-202ENST00000415758 TRAV8-3A0A0A6YYJ7 113 aa10.15□□□□□ -0.78
DDX56-202ENST00000415758 OXTP01178 125 aa10.15□□□□□ -0.78
DDX56-202ENST00000415758 ZNF876PQ49A33 203 aa10.15□□□□□ -0.78
DDX56-202ENST00000415758 CFAP126Q5VTH2 177 aa10.15□□□□□ -0.78
DDX56-202ENST00000415758 TVP23CQ96ET8 276 aa10.15□□□□□ -0.78
DDX56-202ENST00000415758 ATP5SQ99766 215 aa10.15□□□□□ -0.78
DDX56-202ENST00000415758 C17orf112F2Z3M2 114 aa10.14□□□□□ -0.79
DDX56-202ENST00000415758 SCXQ7RTU7 201 aa10.14□□□□□ -0.79
DDX56-202ENST00000415758 ATP6V0E2Q8NHE4 81 aa10.14□□□□□ -0.79
DDX56-202ENST00000415758 PTH2Q96A98 100 aa10.14□□□□□ -0.79
DDX56-202ENST00000415758 HYLS1Q96M11 299 aa10.14□□□□□ -0.79
DDX56-202ENST00000415758 OTORQ9NRC9 128 aa10.14□□□□□ -0.79
DDX56-202ENST00000415758 PGPA6NDG6 321 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 H2AFB2P0C5Z0 115 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 MGST1P10620 155 aaKnown RBP10.13□□□□□ -0.79
DDX56-202ENST00000415758 TAS2R45P59539 299 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 ASAH1Q13510 395 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 KHDC3LQ587J8 217 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 DPPA3Q6W0C5 159 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 CMTM2Q8TAZ6 248 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 ASB13Q8WXK3 278 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 SH3BGRL3Q9H299 93 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 TREM1Q9NP99 234 aa10.13□□□□□ -0.79
DDX56-202ENST00000415758 FAM74A1Q5RGS3 127 aa10.12□□□□□ -0.79
DDX56-202ENST00000415758 CHAC1Q9BUX1 264 aa10.12□□□□□ -0.79
DDX56-202ENST00000415758 MBD2Q9UBB5 411 aa10.12□□□□□ -0.79
DDX56-202ENST00000415758 COX11Q9Y6N1 276 aa10.12□□□□□ -0.79
DDX56-202ENST00000415758 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
DDX56-202ENST00000415758 F6UZH7 168 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 LECT2O14960 151 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 TOR2AQ5JU69 321 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 GOLT1AQ6ZVE7 132 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 Q8N3U1 123 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 C9orf85Q96MD7 179 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 NMES1Q9C002 83 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 OR5AC2Q9NZP5 309 aa10.11□□□□□ -0.79
DDX56-202ENST00000415758 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
DDX56-202ENST00000415758 TRAV8-1A0A0A6YYK1 113 aa10.1□□□□□ -0.79
DDX56-202ENST00000415758 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
DDX56-202ENST00000415758 H0YIZ8 118 aa10.1□□□□□ -0.79
DDX56-202ENST00000415758 FFAR4Q5NUL3 377 aa10.1□□□□□ -0.79
DDX56-202ENST00000415758 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
DDX56-202ENST00000415758 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 PGPEP1LA6NFU8 196 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 LINC00694P0DN24 101 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 LINC01620Q4KN68 170 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 PQLC2Q6ZP29 291 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 DAZ4Q86SG3 579 aaKnown RBP10.09□□□□□ -0.79
DDX56-202ENST00000415758 Q8N976 141 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 DAZ3Q9NR90 486 aaKnown RBP10.09□□□□□ -0.79
DDX56-202ENST00000415758 RPH3ALQ9UNE2 315 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 PLA2G2DQ9UNK4 145 aa10.09□□□□□ -0.79
DDX56-202ENST00000415758 RBFOX3A6NFN3 312 aa10.08□□□□□ -0.8
DDX56-202ENST00000415758 GGTLC3B5MD39 225 aa10.08□□□□□ -0.8
DDX56-202ENST00000415758 TAAR5O14804 337 aa10.08□□□□□ -0.8
DDX56-202ENST00000415758 ZNF80P51504 273 aaPredicted RBP10.08□□□□□ -0.8
DDX56-202ENST00000415758 ZNF506Q5JVG8 444 aa10.08□□□□□ -0.8
DDX56-202ENST00000415758 CIRBP-AS1Q8TBR5 109 aa10.08□□□□□ -0.8
DDX56-202ENST00000415758 A0A087WWC5 75 aa10.07□□□□□ -0.8
DDX56-202ENST00000415758 FAM240BA0A1B0GVZ2 78 aa10.07□□□□□ -0.8
DDX56-202ENST00000415758 ACOT6Q3I5F7 207 aaPredicted RBP10.07□□□□□ -0.8
DDX56-202ENST00000415758 PIK3CD-AS1Q5SR53 167 aa10.07□□□□□ -0.8
DDX56-202ENST00000415758 ZFP2Q6ZN57 461 aa10.07□□□□□ -0.8
DDX56-202ENST00000415758 SERTM2A0A1B0GWG4 89 aa10.06□□□□□ -0.8
DDX56-202ENST00000415758 SIX6O95475 246 aa10.06□□□□□ -0.8
DDX56-202ENST00000415758 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
DDX56-202ENST00000415758 RNASE3P12724 160 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms