RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TRGV4A0A0C4DH28 118 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 M0R2P5 195 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 PFDN1O60925 122 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 GCGP01275 180 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 Q6ZR54 194 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 ZNRF2Q8NHG8 242 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 RASL10AQ92737 203 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 HHLA3Q9XRX5 114 aa7.8□□□□□ -1.16
RFFL-204ENST00000414419 EPPK1P58107 5090 aaKnown RBP7.8□□□□□ -1.16
RFFL-204ENST00000414419 PRSS29PA6NIE9 313 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 FAM74A7A6NL05 159 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 UMAD1C9J7I0 102 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 PEX7O00628 323 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 BCL2L11O43521 198 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 TYMSP04818 313 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 PFN1P07737 140 aaKnown RBP7.79□□□□□ -1.16
RFFL-204ENST00000414419 SEC11BP0C7V7 166 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 VSIG2Q96IQ7 327 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 Q9H8V8 135 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 ICOSQ9Y6W8 199 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 FRAS1Q86XX4 4008 aa7.79□□□□□ -1.16
RFFL-204ENST00000414419 A0A096LPF7 62 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 TRAV34A0A0B4J273 112 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 NBDYA0A0U1RRE5 68 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 IGLV2-11P01706 119 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 ESRGQ1W209 222 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 CST9LP1Q5W188 147 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 OR4C5Q8NGB2 326 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 SFT2D1Q8WV19 159 aa7.78□□□□□ -1.16
RFFL-204ENST00000414419 TRAV4A0A0B4J268 109 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 FABP5P3A8MUU1 101 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 RTL8CO15255 209 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 SFTA3P0C7M3 94 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 TPT1P13693 172 aaKnown RBP7.77□□□□□ -1.17
RFFL-204ENST00000414419 FHITP49789 147 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 ZNF80P51504 273 aaPredicted RBP7.77□□□□□ -1.17
RFFL-204ENST00000414419 CRYBA4P53673 196 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 UBE2G1P62253 170 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 FHL2Q14192 279 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 MRPL23Q16540 153 aaKnown RBP7.77□□□□□ -1.17
RFFL-204ENST00000414419 DPPA3Q6W0C5 159 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 TMUB2Q71RG4 321 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 FAM213BQ8TBF2 198 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 PCNPQ8WW12 178 aaKnown RBP7.77□□□□□ -1.17
RFFL-204ENST00000414419 ZNF479Q96JC4 524 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 LINC00479Q96M42 142 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 DNAH10Q8IVF4 4471 aa7.77□□□□□ -1.17
RFFL-204ENST00000414419 C9JCJ5 164 aa7.76□□□□□ -1.17
RFFL-204ENST00000414419 S100A4P26447 101 aaKnown RBP7.76□□□□□ -1.17
RFFL-204ENST00000414419 TTC32Q5I0X7 151 aa7.76□□□□□ -1.17
RFFL-204ENST00000414419 FMC1Q96HJ9 113 aa7.76□□□□□ -1.17
RFFL-204ENST00000414419 TCEAL7Q9BRU2 100 aa7.76□□□□□ -1.17
RFFL-204ENST00000414419 UPK3BQ9BT76 320 aa7.76□□□□□ -1.17
RFFL-204ENST00000414419 MRPS16Q9Y3D3 137 aaKnown RBP7.76□□□□□ -1.17
RFFL-204ENST00000414419 A0A1B0GV50 99 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 PAGE4O60829 102 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 ORM1P02763 201 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 H2AFB1P0C5Y9 115 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 SRIP30626 198 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 ZNF876PQ49A33 203 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 EIF5AL1Q6IS14 154 aaKnown RBP7.75□□□□□ -1.17
RFFL-204ENST00000414419 Q86TA4 180 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 MBD3L1Q8WWY6 194 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 C11orf21Q9P2W6 132 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 ZFP30Q9Y2G7 519 aa7.75□□□□□ -1.17
RFFL-204ENST00000414419 AKR1C3P42330 323 aa7.74□□□□□ -1.17
RFFL-204ENST00000414419 LGALSLQ3ZCW2 172 aaPredicted RBP7.74□□□□□ -1.17
RFFL-204ENST00000414419 NEGR1Q7Z3B1 354 aa7.74□□□□□ -1.17
RFFL-204ENST00000414419 TXNDC17Q9BRA2 123 aa7.74□□□□□ -1.17
RFFL-204ENST00000414419 A0A1W2PPQ1 181 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 B4DEV8 164 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 TEX46H3BTG2 121 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 K7EQD1 137 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 SIVA1O15304 175 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 CIDEAO60543 219 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 GYPEP15421 78 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 ASIPP42127 132 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 TCTE3Q8IZS6 198 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 C9orf85Q96MD7 179 aa7.73□□□□□ -1.17
RFFL-204ENST00000414419 IGKV3D-20A0A0C4DH25 116 aa7.72□□□□□ -1.17
RFFL-204ENST00000414419 S100A9P06702 114 aaKnown RBP7.72□□□□□ -1.17
RFFL-204ENST00000414419 RAB5CP51148 216 aa7.72□□□□□ -1.17
RFFL-204ENST00000414419 FAM162BQ5T6X4 162 aa7.72□□□□□ -1.17
RFFL-204ENST00000414419 LYPD5Q6UWN5 251 aa7.72□□□□□ -1.17
RFFL-204ENST00000414419 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
RFFL-204ENST00000414419 ZC2HC1AQ96GY0 325 aa7.72□□□□□ -1.17
RFFL-204ENST00000414419 BIRC6Q9NR09 4857 aa7.71□□□□□ -1.17
RFFL-204ENST00000414419 TRBV6-1A0A0K0K1D8 114 aa7.71□□□□□ -1.18
RFFL-204ENST00000414419 A0A1B0GVY2 172 aa7.71□□□□□ -1.18
RFFL-204ENST00000414419 PGPEP1LA6NFU8 196 aa7.71□□□□□ -1.18
RFFL-204ENST00000414419 M0R036 132 aa7.71□□□□□ -1.18
RFFL-204ENST00000414419 RS1O15537 224 aa7.71□□□□□ -1.18
RFFL-204ENST00000414419 NXPH4O95158 308 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms