RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 CTRLP40313 264 aa11.17□□□□□ -0.62
PUDP-202ENST00000412827 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
PUDP-202ENST00000412827 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
PUDP-202ENST00000412827 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
PUDP-202ENST00000412827 C20orf144Q9BQM9 153 aa11.17□□□□□ -0.62
PUDP-202ENST00000412827 TRAPPC1Q9Y5R8 145 aa11.17□□□□□ -0.62
PUDP-202ENST00000412827 C7orf71A4D174 169 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 TRGC2P03986 189 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 DEFB1P60022 68 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 HBBP68871 147 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 GATD1Q8NB37 220 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 SORL1Q92673 2214 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 PHOX2AO14813 284 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 CD7P09564 240 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
PUDP-202ENST00000412827 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 PRR9Q5T870 116 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 FER1L6-AS1Q8NA97 138 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
PUDP-202ENST00000412827 OR5AL1P0C617 328 aa11.15□□□□□ -0.63
PUDP-202ENST00000412827 MRPL54Q6P161 138 aaKnown RBP11.15□□□□□ -0.63
PUDP-202ENST00000412827 TMEM136Q6ZRR5 245 aa11.15□□□□□ -0.63
PUDP-202ENST00000412827 SSBP4Q9BWG4 385 aaPredicted RBP11.15□□□□□ -0.63
PUDP-202ENST00000412827 KNCNA6PVL3 124 aa11.14□□□□□ -0.63
PUDP-202ENST00000412827 SNURFLB1AK76 121 aa11.14□□□□□ -0.63
PUDP-202ENST00000412827 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
PUDP-202ENST00000412827 NUTF2P61970 127 aaKnown RBP11.14□□□□□ -0.63
PUDP-202ENST00000412827 CACNG7P62955 275 aa11.14□□□□□ -0.63
PUDP-202ENST00000412827 C11orf21Q9P2W6 132 aa11.14□□□□□ -0.63
PUDP-202ENST00000412827 SNAI2O43623 268 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 GZMBP10144 247 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 GFI1BQ5VTD9 330 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 LYZL1Q6UWQ5 148 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 FAM159AQ6UWV7 190 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 ZNF575Q86XF7 245 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 STHQ8IWL8 128 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 Q8N1Y9 231 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 MRAPQ8TCY5 172 aa11.13□□□□□ -0.63
PUDP-202ENST00000412827 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
PUDP-202ENST00000412827 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 TMSB15BA0A087X1C1 80 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 A8MZ25 164 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 SPINK4O60575 86 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 PRB2P02812 416 aaPredicted RBP11.12□□□□□ -0.63
PUDP-202ENST00000412827 DEFA6Q01524 100 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 ZNF493Q6ZR52 646 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
PUDP-202ENST00000412827 FRZBQ92765 325 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
PUDP-202ENST00000412827 K7EIL1 84 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BKO60814 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 S100A6P06703 90 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BJP06899 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BOP23527 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BBP33778 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 ASIPP42127 132 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BDP58876 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 RAB4BP61018 213 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BCP62807 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST2H2BEQ16778 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.11□□□□□ -0.63
PUDP-202ENST00000412827 DEFB125Q8N687 156 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BHQ93079 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BNQ99877 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 HIST1H2BMQ99879 126 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
PUDP-202ENST00000412827 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 IGKV3-20P01619 116 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 APCSP02743 223 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 TRGC1P0CF51 173 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 CAMPP49913 170 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 SPINK13Q1W4C9 94 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
PUDP-202ENST00000412827 WFDC10AQ9H1F0 79 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 AGRNO00468 2067 aa11.1□□□□□ -0.63
PUDP-202ENST00000412827 LOC102724200A0A096LPH7 203 aaPredicted RBP11.09□□□□□ -0.63
PUDP-202ENST00000412827 GRIFINA4D1Z8 144 aa11.09□□□□□ -0.63
PUDP-202ENST00000412827 J3KRW8 73 aa11.09□□□□□ -0.63
PUDP-202ENST00000412827 M0R2Z0 102 aa11.09□□□□□ -0.63
PUDP-202ENST00000412827 S100A4P26447 101 aaKnown RBP11.09□□□□□ -0.63
PUDP-202ENST00000412827 APOC4P55056 127 aa11.09□□□□□ -0.63
PUDP-202ENST00000412827 COA6Q5JTJ3 125 aaKnown RBP11.09□□□□□ -0.63
PUDP-202ENST00000412827 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
PUDP-202ENST00000412827 SCRT2Q9NQ03 307 aa11.09□□□□□ -0.63
PUDP-202ENST00000412827 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
PUDP-202ENST00000412827 RBMY1BA6NDE4 496 aaKnown RBP11.08□□□□□ -0.64
PUDP-202ENST00000412827 RBMY1EA6NEQ0 496 aaKnown RBP11.08□□□□□ -0.64
PUDP-202ENST00000412827 CRXO43186 299 aaPredicted RBP11.08□□□□□ -0.64
PUDP-202ENST00000412827 INSP01308 110 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms