RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TYMSP04818 313 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 CRIP1P50238 77 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 TCL1AP56279 114 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 SMUG1Q53HV7 270 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 FAM159AQ6UWV7 190 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 NHLRC2Q8NBF2 726 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 ZNF680Q8NEM1 530 aa5.45□□□□□ -1.54
CPSF4-202ENST00000412686 PCNPQ8WW12 178 aaKnown RBP5.45□□□□□ -1.54
CPSF4-202ENST00000412686 NKX6-2Q9C056 277 aaPredicted RBP5.45□□□□□ -1.54
CPSF4-202ENST00000412686 MRPL16Q9NX20 251 aaKnown RBP5.45□□□□□ -1.54
CPSF4-202ENST00000412686 TRGV1A0A0A0MS02 117 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 TEX48A0A1B0GUV7 120 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 PPT1P50897 306 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 UBE2G1P62253 170 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 ZNF415Q09FC8 603 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 IBA57Q5T440 356 aaKnown RBP5.44□□□□□ -1.54
CPSF4-202ENST00000412686 TMEM88Q6PEY1 159 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 LINC00476Q8WZB0 136 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 ZC2HC1AQ96GY0 325 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 DERL1Q9BUN8 251 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 MANBALQ9NQG1 85 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 APLNQ9ULZ1 77 aa5.44□□□□□ -1.54
CPSF4-202ENST00000412686 KMT2CQ8NEZ4 4911 aaKnown RBP5.43□□□□□ -1.54
CPSF4-202ENST00000412686 IGKV3D-20A0A0C4DH25 116 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 IGHV3-16A0A0C4DH30 117 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 FBLL1A6NHQ2 334 aaKnown RBP5.43□□□□□ -1.54
CPSF4-202ENST00000412686 F5H768 121 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 TEX46H3BTG2 121 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 M0R036 132 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 SPINK4O60575 86 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 LY6G6CO95867 125 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 LTAP01374 205 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 IGHV3-53P01767 116 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 PFN1P07737 140 aaKnown RBP5.43□□□□□ -1.54
CPSF4-202ENST00000412686 BCL2P10415 239 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 HOXA5P20719 270 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 DAZ2Q13117 558 aaKnown RBP5.43□□□□□ -1.54
CPSF4-202ENST00000412686 TDRG1Q3Y452 100 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 SAPCD1Q5SSQ6 148 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 FMC1Q96HJ9 113 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 TCEAL7Q9BRU2 100 aa5.43□□□□□ -1.54
CPSF4-202ENST00000412686 TRGV11A0A075B6L2 103 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 TRBV6-1A0A0K0K1D8 114 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 SH2D1AO60880 128 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 ATP5G1P05496 136 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 RPL35P42766 123 aaKnown RBP5.42□□□□□ -1.54
CPSF4-202ENST00000412686 MEF2BQ02080 365 aaPredicted RBP5.42□□□□□ -1.54
CPSF4-202ENST00000412686 C11orf52Q96A22 123 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 SDF2L1Q9HCN8 221 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 ZFP30Q9Y2G7 519 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
CPSF4-202ENST00000412686 TENM2Q9NT68 2774 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 TRGV2A0A075B6R0 118 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 TMSB15BA0A087X1C1 80 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 A0A0J9YY99 117 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 RAB19A4D1S5 217 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 PGPEP1LA6NFU8 196 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 FABP5P3A8MUU1 101 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 IFNA1P01562 189 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 SFTA3P0C7M3 94 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 RNASE3P12724 160 aaKnown RBP5.41□□□□□ -1.54
CPSF4-202ENST00000412686 BLOC1S1P78537 153 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 RPL19P84098 196 aaKnown RBP5.41□□□□□ -1.54
CPSF4-202ENST00000412686 OR5I1Q13606 314 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 ZNF674Q2M3X9 581 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 CENPWQ5EE01 88 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 PRR27Q6MZM9 219 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 COX8CQ7Z4L0 72 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 ZNF575Q86XF7 245 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 BAGE2Q86Y30 109 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 LYPD6BQ8NI32 183 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 NDUFAF3Q9BU61 184 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 VAX2Q9UIW0 290 aa5.41□□□□□ -1.54
CPSF4-202ENST00000412686 TRBV20OR9-2A0A075B6H5 130 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 TRAV26-1A0A087WT03 109 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 GRIFINA4D1Z8 144 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 B4DEV8 164 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 C9JCJ5 164 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 H3BVH4 76 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 IGLV2-8P01709 118 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 ORM1P02763 201 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 LGALS9BQ3B8N2 356 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 TOR2AQ5JU69 321 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 TEX261Q6UWH6 196 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 POM121L12Q8N7R1 296 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 KCNS1Q96KK3 526 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 C9orf85Q96MD7 179 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 MLST8Q9BVC4 326 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 MED9Q9NWA0 146 aa5.4□□□□□ -1.54
CPSF4-202ENST00000412686 MUC4Q99102 2169 aa5.4□□□□□ -1.55
CPSF4-202ENST00000412686 DNAH1Q9P2D7 4330 aa5.4□□□□□ -1.55
CPSF4-202ENST00000412686 HYDINQ4G0P3 5121 aa5.39□□□□□ -1.55
CPSF4-202ENST00000412686 RYR3Q15413 4870 aa5.39□□□□□ -1.55
CPSF4-202ENST00000412686 RBFOX3A6NFN3 312 aa5.39□□□□□ -1.55
CPSF4-202ENST00000412686 KRBOX1C9JBD0 128 aa5.39□□□□□ -1.55
CPSF4-202ENST00000412686 M0R2P5 195 aa5.39□□□□□ -1.55
CPSF4-202ENST00000412686 PDE6DO43924 150 aa5.39□□□□□ -1.55
CPSF4-202ENST00000412686 NUDT3O95989 172 aa5.39□□□□□ -1.55
CPSF4-202ENST00000412686 S100A9P06702 114 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms