RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 DCANP1Q8TF63 244 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 GFRA4Q9GZZ7 299 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 CLEC5AQ9NY25 188 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 FAM231BA6NCW3 169 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 NUPR2A6NF83 97 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 NPIPB6E9PJ23 425 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 BUB3O43684 328 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 CA1P00915 261 aaPredicted RBP7.43□□□□□ -1.22
LINC01643-201ENST00000412218 IGLV2-11P01706 119 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 C16orf54Q6UWD8 224 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 PRNTQ86SH4 94 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 GLMPQ8WWB7 406 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 MRPL53Q96EL3 112 aaKnown RBP7.43□□□□□ -1.22
LINC01643-201ENST00000412218 C17orf77Q96MU5 243 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 C12orf57Q99622 126 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
LINC01643-201ENST00000412218 ZNF331Q9NQX6 463 aaPredicted RBP7.43□□□□□ -1.22
LINC01643-201ENST00000412218 PSG8Q9UQ74 426 aa7.43□□□□□ -1.22
LINC01643-201ENST00000412218 ZNF688P0C7X2 276 aa7.42□□□□□ -1.22
LINC01643-201ENST00000412218 CT45A10P0DMU9 189 aa7.42□□□□□ -1.22
LINC01643-201ENST00000412218 TCL1AP56279 114 aa7.42□□□□□ -1.22
LINC01643-201ENST00000412218 S100A12P80511 92 aa7.42□□□□□ -1.22
LINC01643-201ENST00000412218 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
LINC01643-201ENST00000412218 TRPT1Q86TN4 253 aaKnown RBP7.42□□□□□ -1.22
LINC01643-201ENST00000412218 STHQ8IWL8 128 aa7.42□□□□□ -1.22
LINC01643-201ENST00000412218 C11orf68Q9H3H3 251 aaKnown RBP7.42□□□□□ -1.22
LINC01643-201ENST00000412218 HYDINQ4G0P3 5121 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 RBAKDNA6NC62 111 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 CEMP1Q6PRD7 247 aaPredicted RBP7.41□□□□□ -1.22
LINC01643-201ENST00000412218 TMEM136Q6ZRR5 245 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 COX8CQ7Z4L0 72 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 OR11H2Q8NH07 326 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 SGK494Q96LW2 274 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 NEU1Q99519 415 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 NDFIP1Q9BT67 221 aa7.41□□□□□ -1.22
LINC01643-201ENST00000412218 KNCNA6PVL3 124 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 HIGD1CA8MV81 97 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 M0R3E3 92 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 GIG44P09565 113 aaPredicted RBP7.4□□□□□ -1.22
LINC01643-201ENST00000412218 CRISP2P16562 243 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 DNLZQ5SXM8 178 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 Q6AWC8 147 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 MRPL54Q6P161 138 aaKnown RBP7.4□□□□□ -1.22
LINC01643-201ENST00000412218 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 NUP35Q8NFH5 326 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 TMEM18Q96B42 140 aa7.4□□□□□ -1.22
LINC01643-201ENST00000412218 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.23
LINC01643-201ENST00000412218 A0A1B0GXF2 115 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 IFITM10A6NMD0 228 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 FABP4P15090 132 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 RPS20P60866 119 aaKnown RBP7.39□□□□□ -1.23
LINC01643-201ENST00000412218 RAB4BP61018 213 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 HBBP68871 147 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 PDZD11Q5EBL8 140 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 PSMG4Q5JS54 123 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
LINC01643-201ENST00000412218 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 ZC2HC1AQ96GY0 325 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 PACRGQ96M98 296 aaPredicted RBP7.39□□□□□ -1.23
LINC01643-201ENST00000412218 HIST1H2BLQ99880 126 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 NRN1Q9NPD7 142 aa7.39□□□□□ -1.23
LINC01643-201ENST00000412218 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
LINC01643-201ENST00000412218 A0A1B0GW15 77 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 SPINK4O60575 86 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
LINC01643-201ENST00000412218 APCSP02743 223 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 NANOS2P60321 138 aaKnown RBP7.38□□□□□ -1.23
LINC01643-201ENST00000412218 SNRPD3P62318 126 aaKnown RBP7.38□□□□□ -1.23
LINC01643-201ENST00000412218 Q0VG73 95 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 OR10J3Q5JRS4 329 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 Q8NAQ8 132 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 C11orf45Q8TAV5 145 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
LINC01643-201ENST00000412218 BORCS7Q96B45 105 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 KLK5Q9Y337 293 aaPredicted RBP7.38□□□□□ -1.23
LINC01643-201ENST00000412218 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
LINC01643-201ENST00000412218 DEFB4AO15263 64 aa7.37□□□□□ -1.23
LINC01643-201ENST00000412218 LY6G6CO95867 125 aa7.37□□□□□ -1.23
LINC01643-201ENST00000412218 AMBPP02760 352 aa7.37□□□□□ -1.23
LINC01643-201ENST00000412218 ESDP10768 282 aa7.37□□□□□ -1.23
LINC01643-201ENST00000412218 FOXA3P55318 350 aaPredicted RBP7.37□□□□□ -1.23
LINC01643-201ENST00000412218 FAM162BQ5T6X4 162 aa7.37□□□□□ -1.23
LINC01643-201ENST00000412218 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
LINC01643-201ENST00000412218 PLECQ15149 4684 aaKnown RBP7.36□□□□□ -1.23
LINC01643-201ENST00000412218 IGHV4-28A0A0C4DH34 117 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 SOCS3O14543 225 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 MIFP14174 115 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 RIGQ13278 110 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 BAGE3Q86Y29 109 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 CSNK1G2-AS1Q8NCQ2 148 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 GTSF1Q8WW33 167 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 C16orf92Q96LL3 132 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms