RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CEP192Q8TEP8 1941 aa2.28□□□□□ -2.05
BRCA1-204ENST00000412061 MED12LQ86YW9 2145 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 KIAA1549LQ6ZVL6 1849 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 S100A8P05109 93 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 ZNF431Q8TF32 576 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-204ENST00000412061 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 A2ML1A8K2U0 1454 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 BRWD1Q9NSI6 2320 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 FREM3P0C091 2139 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 EML5Q05BV3 1969 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 LAMB4A4D0S4 1761 aa2.27□□□□□ -2.05
BRCA1-204ENST00000412061 ANK1P16157 1881 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 AKAP11Q9UKA4 1901 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 CCDC18Q5T9S5 1454 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 TRBV6-8A0A0A6YYG3 113 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 ADCYAP1P18509 176 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 AGPAT4-IT1Q9H0P7 198 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 NAA60Q9H7X0 242 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 MROH2BQ7Z745 1585 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 ABCA5Q8WWZ7 1642 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 ALPK3Q96L96 1907 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 QRICH2Q9H0J4 1663 aa2.26□□□□□ -2.05
BRCA1-204ENST00000412061 CFTRP13569 1480 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 PZPP20742 1482 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 PRXQ9BXM0 1461 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 NLRP1Q9C000 1473 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 RAPGEF2Q9Y4G8 1499 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 KRTAP26-1Q6PEX3 210 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 TEX261Q6UWH6 196 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 GTF2H5Q6ZYL4 71 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 SLC25A26Q70HW3 274 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 FP248Q71RG6 208 aaPredicted RBP2.25□□□□□ -2.05
BRCA1-204ENST00000412061 C5orf17Q8NAS9 161 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 VSTM2AQ8TAG5 236 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 TAS2R8Q9NYW2 309 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 ZFP30Q9Y2G7 519 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 PTPRFP10586 1907 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 PCDH15Q96QU1 1955 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 HFM1A2PYH4 1435 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 PLEKHH2Q8IVE3 1493 aa2.25□□□□□ -2.05
BRCA1-204ENST00000412061 KLF7O75840 302 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-204ENST00000412061 CNBPP62633 177 aaKnown RBP2.24□□□□□ -2.05
BRCA1-204ENST00000412061 CATR1Q13166 79 aa2.24□□□□□ -2.05
BRCA1-204ENST00000412061 MRPL54Q6P161 138 aaKnown RBP2.24□□□□□ -2.05
BRCA1-204ENST00000412061 SERP1Q9Y6X1 66 aa2.24□□□□□ -2.05
BRCA1-204ENST00000412061 LRRC9Q6ZRR7 1453 aa2.24□□□□□ -2.05
BRCA1-204ENST00000412061 CECR2Q9BXF3 1484 aa2.24□□□□□ -2.05
BRCA1-204ENST00000412061 BAZ1AQ9NRL2 1556 aaPredicted RBP2.24□□□□□ -2.05
BRCA1-204ENST00000412061 BAZ2BQ9UIF8 2168 aaKnown RBP2.23□□□□□ -2.05
BRCA1-204ENST00000412061 RTTNQ86VV8 2226 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 F8W1H4 67 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 TNFP01375 233 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 IL5P05113 134 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 PRB4P10163 310 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-204ENST00000412061 Q56UQ5 140 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 C10orf55Q5SWW7 151 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 OR2T2Q6IF00 324 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 DYNLRB2Q8TF09 96 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 C4orf3Q8WVX3 66 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 LSM10Q969L4 123 aaKnown RBP2.23□□□□□ -2.05
BRCA1-204ENST00000412061 ORMDL1Q9P0S3 153 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 BLMP54132 1417 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-204ENST00000412061 POLA1P09884 1462 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-204ENST00000412061 TOP2AP11388 1531 aaKnown RBP2.23□□□□□ -2.05
BRCA1-204ENST00000412061 FREM1Q5H8C1 2179 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 BCORL1Q5H9F3 1711 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 CASZ1Q86V15 1759 aa2.23□□□□□ -2.05
BRCA1-204ENST00000412061 NINQ8N4C6 2090 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 TRAV17A0A0B4J275 112 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 TMEM218A2RU14 115 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 MCRIP1C9JLW8 97 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 GEMIN2O14893 280 aaKnown RBP2.22□□□□□ -2.05
BRCA1-204ENST00000412061 CCL25O15444 150 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 C8orf59Q8N0T1 100 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-204ENST00000412061 PLPP5Q8NEB5 264 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 OR10AG1Q8NH19 301 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 PATE1Q8WXA2 126 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 SPTSSAQ969W0 71 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 LINC00052Q96N35 136 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 MRPL57Q9BQC6 102 aaKnown RBP2.22□□□□□ -2.05
BRCA1-204ENST00000412061 TMEM242Q9NWH2 141 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 IER3IP1Q9Y5U9 82 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 FN1P02751 2386 aaKnown RBP2.22□□□□□ -2.05
BRCA1-204ENST00000412061 LRP5O75197 1615 aa2.22□□□□□ -2.05
BRCA1-204ENST00000412061 MDC1Q14676 2089 aaKnown RBP2.22□□□□□ -2.05
BRCA1-204ENST00000412061 APOC4-APOC2K7ER74 178 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 CCL16O15467 120 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 SNCGO76070 127 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 APOC2P02655 101 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 PIRTP0C851 137 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 COX7CP15954 63 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 FAM74A1Q5RGS3 127 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 Q6AWC8 147 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 C3orf62Q6ZUJ4 267 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 COA5Q86WW8 74 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 ARHGAP35Q9NRY4 1499 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 WIZO95785 1651 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 DOCK10Q96BY6 2186 aa2.21□□□□□ -2.06
BRCA1-204ENST00000412061 STRCP1A6NGW2 1772 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms