RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 KIR2DL5AQ8N109 375 aa9.41□□□□□ -0.9
CHRNA1-205ENST00000409542 DYNLRB2Q8TF09 96 aa9.41□□□□□ -0.9
CHRNA1-205ENST00000409542 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
CHRNA1-205ENST00000409542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 A0A1W2PS18 150 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 FBLL1A6NHQ2 334 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 RPL7P18124 248 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 PSG9Q00887 426 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 PSG3Q16557 428 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 GTSF1Q8WW33 167 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 C17orf77Q96MU5 243 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 NDUFAF3Q9BU61 184 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 PSG8Q9UQ74 426 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 S4R3C0 116 aa9.4□□□□□ -0.9
CHRNA1-205ENST00000409542 TRAV8-1A0A0A6YYK1 113 aa9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 CTSGP08311 255 aa9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 ATP5G2Q06055 141 aa9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 CEMP1Q6PRD7 247 aaPredicted RBP9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 ZNF502Q8TBZ5 544 aa9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 AAMDCQ9H7C9 122 aa9.4□□□□□ -0.91
CHRNA1-205ENST00000409542 ZNF705FA8MVS1 300 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 AMTP48728 403 aa9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 OR2D3Q8NGH3 330 aa9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 ZC2HC1AQ96GY0 325 aa9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 RABAC1Q9UI14 185 aa9.39□□□□□ -0.91
CHRNA1-205ENST00000409542 NUPR2A6NF83 97 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 OR2T8A6NH00 312 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 IGHV3-23P01764 117 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 CSN1S1P47710 185 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 CAMPP49913 170 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 TOMM20LQ6UXN7 152 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 PGLYRP4Q96LB8 373 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
CHRNA1-205ENST00000409542 DNAH6Q9C0G6 4158 aa9.37□□□□□ -0.91
CHRNA1-205ENST00000409542 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-205ENST00000409542 A0A1B0GW15 77 aa9.37□□□□□ -0.91
CHRNA1-205ENST00000409542 LBHQ53QV2 105 aaPredicted RBP9.37□□□□□ -0.91
CHRNA1-205ENST00000409542 Q6AWC8 147 aa9.37□□□□□ -0.91
CHRNA1-205ENST00000409542 ATP6V0BQ99437 205 aa9.37□□□□□ -0.91
CHRNA1-205ENST00000409542 C20orf144Q9BQM9 153 aa9.37□□□□□ -0.91
CHRNA1-205ENST00000409542 A0A087X0K7 114 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 TMEM213A2RRL7 107 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 LGALS9O00182 355 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 APOHP02749 345 aaPredicted RBP9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 PMCHP20382 165 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 C15orf32Q32M92 178 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 NIT1Q86X76 327 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 Q8N976 141 aa9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
CHRNA1-205ENST00000409542 M0R3E3 92 aa9.35□□□□□ -0.91
CHRNA1-205ENST00000409542 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
CHRNA1-205ENST00000409542 EEF1AKMT3Q96AZ1 226 aa9.35□□□□□ -0.91
CHRNA1-205ENST00000409542 CCDC140Q96MF4 163 aa9.35□□□□□ -0.91
CHRNA1-205ENST00000409542 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
CHRNA1-205ENST00000409542 TRBV7-1A0A0A6YYK4 115 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 CHEK1O14757 476 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 CT45A10P0DMU9 189 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 GPR183P32249 361 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 KRTDAPP60985 99 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 RIGQ13278 110 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 DEFB135Q30KP9 77 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 SAPCD1Q5SSQ6 148 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 GPHB5Q86YW7 130 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 NDFIP1Q9BT67 221 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 SPRY2O43597 315 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 HSBP1O75506 76 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 RAB4AP20338 218 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 CRIP1P50238 77 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 CLEC19AQ6UXS0 136 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 CHCHD1Q96BP2 118 aaKnown RBP9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 VAMP8Q9BV40 100 aa9.34□□□□□ -0.91
CHRNA1-205ENST00000409542 C3orf79P0CE67 100 aa9.33□□□□□ -0.92
CHRNA1-205ENST00000409542 ARL3P36405 182 aa9.33□□□□□ -0.92
CHRNA1-205ENST00000409542 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
CHRNA1-205ENST00000409542 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
CHRNA1-205ENST00000409542 PHLDA1Q8WV24 401 aaPredicted RBP9.33□□□□□ -0.92
CHRNA1-205ENST00000409542 TP53TG1Q9Y2A0 90 aa9.33□□□□□ -0.92
CHRNA1-205ENST00000409542 KLK5Q9Y337 293 aaPredicted RBP9.33□□□□□ -0.92
CHRNA1-205ENST00000409542 SH2D1AO60880 128 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms