RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 ISOC2Q96AB3 205 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 KCNS1Q96KK3 526 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 C11orf21Q9P2W6 132 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 HUWE1Q7Z6Z7 4374 aaKnown RBP14.81□□□□□ -0.04
VSX1-203ENST00000409285 ANXA2RQ3ZCQ2 193 aa14.81□□□□□ -0.04
VSX1-203ENST00000409285 SVBPQ8N300 66 aa14.81□□□□□ -0.04
VSX1-203ENST00000409285 ADIRFQ15847 76 aa14.8□□□□□ -0.04
VSX1-203ENST00000409285 OR11H2Q8NH07 326 aa14.8□□□□□ -0.04
VSX1-203ENST00000409285 IGHV3OR16-12A0A075B7B8 117 aa14.79□□□□□ -0.04
VSX1-203ENST00000409285 M0R036 132 aa14.79□□□□□ -0.04
VSX1-203ENST00000409285 MIFP14174 115 aa14.79□□□□□ -0.04
VSX1-203ENST00000409285 IBA57Q5T440 356 aaKnown RBP14.79□□□□□ -0.04
VSX1-203ENST00000409285 DAZAP1Q96EP5 407 aaKnown RBP14.79□□□□□ -0.04
VSX1-203ENST00000409285 IGKV3D-20A0A0C4DH25 116 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 P01737 135 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 CXCL1P09341 107 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 NHLRC4P0CG21 123 aaPredicted RBP14.78□□□□□ -0.04
VSX1-203ENST00000409285 MUC21Q5SSG8 566 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 ZNF493Q6ZR52 646 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
VSX1-203ENST00000409285 ZMAT4Q9H898 229 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 OSTCQ9NRP0 149 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 NAGKQ9UJ70 344 aa14.78□□□□□ -0.04
VSX1-203ENST00000409285 ORM1P02763 201 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 RRN3P1Q2M238 152 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 DNLZQ5SXM8 178 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 NUDT10Q8NFP7 164 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 RNASE8Q8TDE3 154 aaKnown RBP14.77□□□□□ -0.04
VSX1-203ENST00000409285 NUDT11Q96G61 164 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 RNASE7Q9H1E1 156 aaKnown RBP14.77□□□□□ -0.04
VSX1-203ENST00000409285 RETNQ9HD89 108 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 TP53TG3Q9ULZ0 132 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 STAB2Q8WWQ8 2551 aa14.77□□□□□ -0.04
VSX1-203ENST00000409285 TRGV11A0A075B6L2 103 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 B4DEV8 164 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 SNAPINO95295 136 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 ERVFC1-1P60608 527 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 ZNF575Q86XF7 245 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 Q8NAQ8 132 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 C16orf74Q96GX8 76 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 SFRP2Q96HF1 295 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 MUC4Q99102 2169 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 CBY3A6NI87 242 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 ZNF705GA8MUZ8 300 aaPredicted RBP14.76□□□□□ -0.05
VSX1-203ENST00000409285 TYMSP04818 313 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 CT83Q5H943 113 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 CLRN3Q8NCR9 226 aa14.76□□□□□ -0.05
VSX1-203ENST00000409285 RPP21Q9H633 154 aaKnown RBP14.76□□□□□ -0.05
VSX1-203ENST00000409285 C15orf54Q8N8G6 183 aa14.75□□□□□ -0.05
VSX1-203ENST00000409285 C11orf72Q8NBR9 251 aa14.75□□□□□ -0.05
VSX1-203ENST00000409285 TMEM189A5PLL7 270 aa14.74□□□□□ -0.05
VSX1-203ENST00000409285 HTN1P15515 57 aa14.74□□□□□ -0.05
VSX1-203ENST00000409285 AZU1P20160 251 aa14.74□□□□□ -0.05
VSX1-203ENST00000409285 RPS20P60866 119 aaKnown RBP14.74□□□□□ -0.05
VSX1-203ENST00000409285 C11orf68Q9H3H3 251 aaKnown RBP14.74□□□□□ -0.05
VSX1-203ENST00000409285 IGHV3-16A0A0C4DH30 117 aa14.73□□□□□ -0.05
VSX1-203ENST00000409285 PLAC8L1A1L4L8 177 aa14.73□□□□□ -0.05
VSX1-203ENST00000409285 PRM2P04554 102 aa14.73□□□□□ -0.05
VSX1-203ENST00000409285 RPL19P84098 196 aaKnown RBP14.73□□□□□ -0.05
VSX1-203ENST00000409285 OR2D3Q8NGH3 330 aa14.73□□□□□ -0.05
VSX1-203ENST00000409285 IL17DQ8TAD2 202 aa14.73□□□□□ -0.05
VSX1-203ENST00000409285 XKRY2A2RUG3 117 aa14.72□□□□□ -0.05
VSX1-203ENST00000409285 GATCO43716 136 aaKnown RBP14.72□□□□□ -0.05
VSX1-203ENST00000409285 TCL1AP56279 114 aa14.72□□□□□ -0.05
VSX1-203ENST00000409285 ZNF415Q09FC8 603 aa14.72□□□□□ -0.05
VSX1-203ENST00000409285 IGHV4-28A0A0C4DH34 117 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 GNRH2O43555 120 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 MED14OSP0DP75 135 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 ASIPP42127 132 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 RHEBQ15382 184 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 ATRAIDQ6UW56 229 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 OR10G8Q8NGN5 311 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 IL36BQ9NZH7 164 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 V9GYV3 84 aa14.71□□□□□ -0.05
VSX1-203ENST00000409285 PPP1R2P9O14990 202 aa14.7□□□□□ -0.06
VSX1-203ENST00000409285 RNASE3P12724 160 aaKnown RBP14.7□□□□□ -0.06
VSX1-203ENST00000409285 C9orf85Q96MD7 179 aa14.7□□□□□ -0.06
VSX1-203ENST00000409285 MDFICQ9P1T7 246 aa14.7□□□□□ -0.06
VSX1-203ENST00000409285 TMSB15BA0A087X1C1 80 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 C7orf77A4D0Y5 90 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 A8MWL6 223 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 DAZ2Q13117 558 aaKnown RBP14.69□□□□□ -0.06
VSX1-203ENST00000409285 ANAPC16Q96DE5 110 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 FAM231BA6NCW3 169 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 MT-ND4LP03901 98 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 RNF212Q495C1 297 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 SSBP4Q9BWG4 385 aaPredicted RBP14.69□□□□□ -0.06
VSX1-203ENST00000409285 GFRA4Q9GZZ7 299 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 SCRT2Q9NQ03 307 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 RPS10P5Q9NQ39 176 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 GSN-AS1Q9NRJ2 163 aa14.69□□□□□ -0.06
VSX1-203ENST00000409285 SNURFLB1AK76 121 aa14.68□□□□□ -0.06
VSX1-203ENST00000409285 OR5AL1P0C617 328 aa14.68□□□□□ -0.06
VSX1-203ENST00000409285 IGLC6P0CF74 106 aa14.68□□□□□ -0.06
VSX1-203ENST00000409285 TSKUQ8WUA8 353 aa14.68□□□□□ -0.06
VSX1-203ENST00000409285 SPXQ9BT56 116 aa14.68□□□□□ -0.06
VSX1-203ENST00000409285 TIMM8BQ9Y5J9 83 aaPredicted RBP14.68□□□□□ -0.06
VSX1-203ENST00000409285 NACAE9PAV3 2078 aa14.67□□□□□ -0.06
VSX1-203ENST00000409285 A0A1W2PPQ1 181 aa14.67□□□□□ -0.06
VSX1-203ENST00000409285 GRIFINA4D1Z8 144 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms