RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NEGR1Q7Z3B1 354 aa6.29□□□□□ -1.4
SNORD88A-201ENST00000408314 IQCF2Q8IXL9 164 aa6.29□□□□□ -1.4
SNORD88A-201ENST00000408314 CYB561D1Q8N8Q1 229 aa6.29□□□□□ -1.4
SNORD88A-201ENST00000408314 OR2T35Q8NGX2 323 aa6.29□□□□□ -1.4
SNORD88A-201ENST00000408314 TXNDC17Q9BRA2 123 aa6.29□□□□□ -1.4
SNORD88A-201ENST00000408314 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
SNORD88A-201ENST00000408314 CTXND1A0A1B0GTU2 59 aa6.28□□□□□ -1.4
SNORD88A-201ENST00000408314 HMGB3O15347 200 aaKnown RBP6.28□□□□□ -1.4
SNORD88A-201ENST00000408314 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
SNORD88A-201ENST00000408314 TMEM75Q8N9X5 138 aa6.28□□□□□ -1.4
SNORD88A-201ENST00000408314 OR4C5Q8NGB2 326 aa6.28□□□□□ -1.4
SNORD88A-201ENST00000408314 SUN5Q8TC36 379 aa6.28□□□□□ -1.4
SNORD88A-201ENST00000408314 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
SNORD88A-201ENST00000408314 DYNC1H1Q14204 4646 aaKnown RBP6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 IGHV3-16A0A0C4DH30 117 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 RNF222A6NCQ9 220 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 C16orf90A8MZG2 172 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 F6UZH7 168 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 EREGO14944 169 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 EIF3GO75821 320 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 NXPH4O95158 308 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 PFN1P07737 140 aaKnown RBP6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 GNG5P63218 68 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 FLI1Q01543 452 aaPredicted RBP6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 FHL2Q14192 279 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 NFE4Q86UQ8 179 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 STOML3Q8TAV4 291 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 TCEAL7Q9BRU2 100 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 SH3BGRL3Q9H299 93 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 MDFICQ9P1T7 246 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 EPDR1Q9UM22 224 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
SNORD88A-201ENST00000408314 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 GCGP01275 180 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 IFNA7P01567 189 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 TYMSP04818 313 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 GYPEP15421 78 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 TNP2Q05952 138 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 RPL7L1Q6DKI1 246 aaKnown RBP6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 Q6ZQT7 251 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 PSG8Q9UQ74 426 aa6.26□□□□□ -1.41
SNORD88A-201ENST00000408314 GGTLC3B5MD39 225 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 ARPC5O15511 151 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 SFTA3P0C7M3 94 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 EVI2AP22794 236 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 ZNF876PQ49A33 203 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 LYPD5Q6UWN5 251 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 PRNTQ86SH4 94 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 PTH2Q96A98 100 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 ZNF479Q96JC4 524 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 PRADC1Q9BSG0 188 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 LY96Q9Y6Y9 160 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 ARL2-SNX15V9GYD0 113 aa6.25□□□□□ -1.41
SNORD88A-201ENST00000408314 MAP1LC3B2A6NCE7 125 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 K7EQD1 137 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 PEX7O00628 323 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 GNRH2O43555 120 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 S100A4P26447 101 aaKnown RBP6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 TIRAPP58753 221 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 ERVFC1-1P60608 527 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 UBE2G1P62253 170 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 EIF5AP63241 154 aaKnown RBP6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 ZNF345Q14585 488 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 RHOHQ15669 191 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 Q5BKY6 102 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 NHLRC2Q8NBF2 726 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 TVP23CQ96ET8 276 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 MAP1LC3BQ9GZQ8 125 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 ZFP30Q9Y2G7 519 aa6.24□□□□□ -1.41
SNORD88A-201ENST00000408314 PKD1P98161 4303 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 TRBV6-4A0A1B0GX49 114 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 FABP5P3A8MUU1 101 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 UMAD1C9J7I0 102 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 MGST1P10620 155 aaKnown RBP6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 ASIPP42127 132 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 FHITP49789 147 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 LINC00315P59091 139 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 PIK3CD-AS1Q5SR53 167 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 ZNF575Q86XF7 245 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 SGK494Q96LW2 274 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
SNORD88A-201ENST00000408314 TRAV8-6A0A0B4J262 113 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 A0A0D9SG52 128 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 KANTRA0A1W2PQU2 76 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 FAM74A7A6NL05 159 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 A8MWV9 139 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 RS1O15537 224 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 CDK2AP2O75956 126 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 IGLV2-11P01706 119 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 GATA1P15976 413 aaPredicted RBP6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 UBE2G2P60604 165 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 CDPF1Q6NVV7 123 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 SPATA12Q7Z6I5 190 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 Q86TA4 180 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 SYT8Q8NBV8 401 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 FMC1Q96HJ9 113 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms