RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 MLST8Q9BVC4 326 aa12.3□□□□□ -0.44
CCDC85A-201ENST00000407595 PRSS22Q9GZN4 317 aa12.3□□□□□ -0.44
CCDC85A-201ENST00000407595 VGLL1Q99990 258 aa12.3□□□□□ -0.44
CCDC85A-201ENST00000407595 IGLV1-47P01700 117 aa12.3□□□□□ -0.44
CCDC85A-201ENST00000407595 TMEM170BQ5T4T1 132 aa12.3□□□□□ -0.44
CCDC85A-201ENST00000407595 ZNF491Q8N8L2 437 aa12.3□□□□□ -0.44
CCDC85A-201ENST00000407595 TRAV26-2A0A0B4J265 109 aa12.29□□□□□ -0.44
CCDC85A-201ENST00000407595 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
CCDC85A-201ENST00000407595 PRR25Q96S07 402 aa12.29□□□□□ -0.44
CCDC85A-201ENST00000407595 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
CCDC85A-201ENST00000407595 EGR2P11161 476 aaPredicted RBP12.29□□□□□ -0.44
CCDC85A-201ENST00000407595 BLCAPP62952 87 aa12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 CD300EQ496F6 205 aaPredicted RBP12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 NPIPB6E9PJ23 425 aa12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 OVOL3O00110 214 aa12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 EMP1P54849 157 aa12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 MRPL35Q9NZE8 188 aaKnown RBP12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 IGHV1-69DA0A0B4J2H0 117 aa12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 IGHV1-69P01742 117 aa12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 FXYD2P54710 66 aa12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 SRSF1Q07955 248 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC85A-201ENST00000407595 DCHS1Q96JQ0 3298 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 HOXA3O43365 443 aaPredicted RBP12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 IGLV2-23P01705 113 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 ZNF688P0C7X2 276 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 AZU1P20160 251 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 LAGE3Q14657 143 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 SIGLEC15Q6ZMC9 328 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 TMEM14CQ9P0S9 112 aa12.27□□□□□ -0.44
CCDC85A-201ENST00000407595 PRSS2P07478 247 aa12.27□□□□□ -0.45
CCDC85A-201ENST00000407595 DYNAPQ8N1N2 210 aa12.27□□□□□ -0.45
CCDC85A-201ENST00000407595 A0A1W2PPR1 153 aa12.27□□□□□ -0.45
CCDC85A-201ENST00000407595 ZNF815PA8K554 130 aa12.27□□□□□ -0.45
CCDC85A-201ENST00000407595 RNF5Q99942 180 aa12.27□□□□□ -0.45
CCDC85A-201ENST00000407595 PSMB11A5LHX3 300 aa12.26□□□□□ -0.45
CCDC85A-201ENST00000407595 H3BRN7 92 aa12.26□□□□□ -0.45
CCDC85A-201ENST00000407595 SPRY2O43597 315 aa12.26□□□□□ -0.45
CCDC85A-201ENST00000407595 Q96MF0 132 aa12.26□□□□□ -0.45
CCDC85A-201ENST00000407595 RNASE4P34096 147 aaKnown RBP12.26□□□□□ -0.45
CCDC85A-201ENST00000407595 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
CCDC85A-201ENST00000407595 NPFFR1Q9GZQ6 430 aa12.25□□□□□ -0.45
CCDC85A-201ENST00000407595 LINC01548A6NM66 108 aa12.25□□□□□ -0.45
CCDC85A-201ENST00000407595 CRXO43186 299 aaPredicted RBP12.25□□□□□ -0.45
CCDC85A-201ENST00000407595 FBXL19-AS1Q494R0 122 aa12.25□□□□□ -0.45
CCDC85A-201ENST00000407595 PGPEP1Q9NXJ5 209 aa12.25□□□□□ -0.45
CCDC85A-201ENST00000407595 ID1P41134 155 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 BOD1L2Q8IYS8 172 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 KALRNO60229 2985 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 IGHV4-59P01825 116 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 PSMG4Q5JS54 123 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 CENPVL3A0A0U1RRI6 287 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 OOSP1A8MZH6 123 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 WFDC2Q14508 124 aa12.24□□□□□ -0.45
CCDC85A-201ENST00000407595 DUX3Q96PT4 197 aa12.23□□□□□ -0.45
CCDC85A-201ENST00000407595 SMPXQ9UHP9 88 aa12.23□□□□□ -0.45
CCDC85A-201ENST00000407595 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
CCDC85A-201ENST00000407595 CKS1BP61024 79 aa12.23□□□□□ -0.45
CCDC85A-201ENST00000407595 PDE6HQ13956 83 aa12.23□□□□□ -0.45
CCDC85A-201ENST00000407595 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
CCDC85A-201ENST00000407595 TNRC6BQ9UPQ9 1833 aaKnown RBP12.23□□□□□ -0.45
CCDC85A-201ENST00000407595 I3L2K1 104 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 K7EIM0 57 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 GAGE12HA6NDE8 117 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 C2orf91Q6ZV80 131 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 PRORYQ9H606 182 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 IGHV7-81A0A0B4J1V7 117 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 NDUFS8O00217 210 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 MYCNOSP40205 109 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 SYNJ2BPP57105 145 aa12.22□□□□□ -0.45
CCDC85A-201ENST00000407595 LAMA5O15230 3695 aa12.21□□□□□ -0.45
CCDC85A-201ENST00000407595 FCN3O75636 299 aa12.21□□□□□ -0.45
CCDC85A-201ENST00000407595 RAB9AP51151 201 aa12.21□□□□□ -0.45
CCDC85A-201ENST00000407595 CRYGCP07315 174 aa12.21□□□□□ -0.45
CCDC85A-201ENST00000407595 OR11H6Q8NGC7 330 aa12.21□□□□□ -0.45
CCDC85A-201ENST00000407595 ZNF256Q9Y2P7 627 aaPredicted RBP12.21□□□□□ -0.45
CCDC85A-201ENST00000407595 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.46
CCDC85A-201ENST00000407595 G3V4G9 280 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 DEFB1P60022 68 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 ASIPP42127 132 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 DEFB112Q30KQ8 113 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 CEND1Q8N111 149 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 FLNCQ14315 2725 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 FAM159AQ6UWV7 190 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 SIVA1O15304 175 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 CRIP1P50238 77 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 KIR2DL4Q99706 377 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 RHPN1-AS1Q9BWJ2 59 aa12.2□□□□□ -0.46
CCDC85A-201ENST00000407595 TEX22C9J3V5 150 aa12.19□□□□□ -0.46
CCDC85A-201ENST00000407595 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
CCDC85A-201ENST00000407595 SLC50A1Q9BRV3 221 aa12.19□□□□□ -0.46
CCDC85A-201ENST00000407595 PTPRBP23467 1997 aa12.19□□□□□ -0.46
CCDC85A-201ENST00000407595 H7C1H1 209 aa12.19□□□□□ -0.46
CCDC85A-201ENST00000407595 C1orf122Q6ZSJ8 110 aa12.19□□□□□ -0.46
CCDC85A-201ENST00000407595 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms