RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SMIM12Q96EX1 92 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 KCNS1Q96KK3 526 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 LINC00467Q9BRT7 94 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 BIN3Q9NQY0 253 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 NAGKQ9UJ70 344 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 TRGV11A0A075B6L2 103 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 SNURFLB1AK76 121 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 RBMY1A1P0DJD3 496 aaKnown RBP7.59□□□□□ -1.19
RPAIN-204ENST00000405578 RBMY1CP0DJD4 496 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 EMP1P54849 157 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 RBMY1FQ15415 496 aaKnown RBP7.59□□□□□ -1.19
RPAIN-204ENST00000405578 ANXA2RQ3ZCQ2 193 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 CENPWQ5EE01 88 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 FAM162BQ5T6X4 162 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 C8orf49Q96NF6 230 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 SDF2L1Q9HCN8 221 aa7.59□□□□□ -1.19
RPAIN-204ENST00000405578 CXorf65A6NEN9 183 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 DEFB4AO15263 64 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 SPART-AS1P0CW21 52 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 ZNF674Q2M3X9 581 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 COX8CQ7Z4L0 72 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 C11orf45Q8TAV5 145 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 DERL1Q9BUN8 251 aa7.58□□□□□ -1.2
RPAIN-204ENST00000405578 TIMM8BQ9Y5J9 83 aaPredicted RBP7.58□□□□□ -1.2
RPAIN-204ENST00000405578 AGRNO00468 2067 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 LYRM9A8MSI8 78 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 C9JCJ5 164 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 ORM1P02763 201 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 MGST1P10620 155 aaKnown RBP7.57□□□□□ -1.2
RPAIN-204ENST00000405578 ZNF415Q09FC8 603 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 TDRG1Q3Y452 100 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 IBA57Q5T440 356 aaKnown RBP7.57□□□□□ -1.2
RPAIN-204ENST00000405578 NHLRC2Q8NBF2 726 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 RNASE8Q8TDE3 154 aaKnown RBP7.57□□□□□ -1.2
RPAIN-204ENST00000405578 DAZAP1Q96EP5 407 aaKnown RBP7.57□□□□□ -1.2
RPAIN-204ENST00000405578 ZC2HC1AQ96GY0 325 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 SMIM7Q9BQ49 75 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 PARLQ9H300 379 aa7.57□□□□□ -1.2
RPAIN-204ENST00000405578 RAB19A4D1S5 217 aa7.56□□□□□ -1.2
RPAIN-204ENST00000405578 SH2D1AO60880 128 aa7.56□□□□□ -1.2
RPAIN-204ENST00000405578 AZU1P20160 251 aa7.56□□□□□ -1.2
RPAIN-204ENST00000405578 ZNF80P51504 273 aaPredicted RBP7.56□□□□□ -1.2
RPAIN-204ENST00000405578 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
RPAIN-204ENST00000405578 PRR27Q6MZM9 219 aa7.56□□□□□ -1.2
RPAIN-204ENST00000405578 MLST8Q9BVC4 326 aa7.56□□□□□ -1.2
RPAIN-204ENST00000405578 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 LOC105371267A0A1B0GV96 52 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 ZNF727A8MUV8 499 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 B4DEV8 164 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 PRM2P04554 102 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 SRP19P09132 144 aaKnown RBP7.55□□□□□ -1.2
RPAIN-204ENST00000405578 S100A4P26447 101 aaKnown RBP7.55□□□□□ -1.2
RPAIN-204ENST00000405578 DAZ2Q13117 558 aaKnown RBP7.55□□□□□ -1.2
RPAIN-204ENST00000405578 OR5I1Q13606 314 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 FAM222AQ5U5X8 452 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 SPXQ9BT56 116 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 NOP10Q9NPE3 64 aaKnown RBP7.55□□□□□ -1.2
RPAIN-204ENST00000405578 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
RPAIN-204ENST00000405578 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
RPAIN-204ENST00000405578 XKRY2A2RUG3 117 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 NUPR2A6NF83 97 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 ASIPP42127 132 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 CRIP1P50238 77 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 TCL1AP56279 114 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 DAD1P61803 113 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 SOHLH1Q5JUK2 328 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 Q6ZQT7 251 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 LY96Q9Y6Y9 160 aa7.54□□□□□ -1.2
RPAIN-204ENST00000405578 VPS13DQ5THJ4 4388 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 M0R036 132 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 GNRH2O43555 120 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 P01737 135 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 DEFB130BP0DP73 79 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 DEFB130AP0DP74 79 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 LINC01559Q495D7 138 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 TP53TG3Q9ULZ0 132 aa7.53□□□□□ -1.2
RPAIN-204ENST00000405578 TRBV20OR9-2A0A075B6H5 130 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 TRGV1A0A0A0MS02 117 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 IGHV3-16A0A0C4DH30 117 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 PLAC8L1A1L4L8 177 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 KRBOX1C9JBD0 128 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 IGLV2-8P01709 118 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 TYMSP04818 313 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.21
RPAIN-204ENST00000405578 RPS20P60866 119 aaKnown RBP7.52□□□□□ -1.21
RPAIN-204ENST00000405578 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
RPAIN-204ENST00000405578 TMEM241Q24JQ0 296 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 LGALS9BQ3B8N2 356 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 UQCC3Q6UW78 93 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 OCC1Q8TAD7 63 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
RPAIN-204ENST00000405578 TRGV2A0A075B6R0 118 aa7.51□□□□□ -1.21
RPAIN-204ENST00000405578 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
RPAIN-204ENST00000405578 IGKV3D-20A0A0C4DH25 116 aa7.51□□□□□ -1.21
RPAIN-204ENST00000405578 PGPEP1LA6NFU8 196 aa7.51□□□□□ -1.21
RPAIN-204ENST00000405578 M0R2P5 195 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms