RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 NCBP2LA6PVI3 153 aaKnown RBP11.91□□□□□ -0.5
ATG4B-205ENST00000404914 SRSF2Q01130 221 aaKnown RBP11.91□□□□□ -0.5
ATG4B-205ENST00000404914 DPM3Q9P2X0 92 aa11.91□□□□□ -0.5
ATG4B-205ENST00000404914 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 NDUFS8O00217 210 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 COL12A1Q99715 3063 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 CKS1BP61024 79 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 TAL2Q16559 108 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 NFE4Q86UQ8 179 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 ZNF502Q8TBZ5 544 aa11.9□□□□□ -0.5
ATG4B-205ENST00000404914 ZNF48Q96MX3 618 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-205ENST00000404914 PSMG4Q5JS54 123 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 PTH2Q96A98 100 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-205ENST00000404914 A0A1B0GV72 72 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 J3QR89 54 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 LGALS1P09382 135 aaKnown RBP11.89□□□□□ -0.51
ATG4B-205ENST00000404914 PLEKHB2Q96CS7 222 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 IGF1P05019 195 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 PRR9Q5T870 116 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 DEFB104AQ8WTQ1 72 aa11.89□□□□□ -0.51
ATG4B-205ENST00000404914 MYMXA0A1B0GTQ4 84 aa11.88□□□□□ -0.51
ATG4B-205ENST00000404914 GLMPQ8WWB7 406 aa11.88□□□□□ -0.51
ATG4B-205ENST00000404914 CDIP1Q9H305 208 aa11.88□□□□□ -0.51
ATG4B-205ENST00000404914 H3BVH4 76 aa11.88□□□□□ -0.51
ATG4B-205ENST00000404914 APOMO95445 188 aa11.88□□□□□ -0.51
ATG4B-205ENST00000404914 ZFP2Q6ZN57 461 aa11.88□□□□□ -0.51
ATG4B-205ENST00000404914 TRAV26-1A0A087WT03 109 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 F8VRH5 84 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 J3KRW8 73 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 SYT8Q8NBV8 401 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 OR11H12B2RN74 326 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 BUB3O43684 328 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 OR11H1Q8NG94 326 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 OR11H2Q8NH07 326 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 ZFAND3Q9H8U3 227 aa11.87□□□□□ -0.51
ATG4B-205ENST00000404914 ANKHD1Q8IWZ3 2542 aaKnown RBP11.86□□□□□ -0.51
ATG4B-205ENST00000404914 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-205ENST00000404914 CLPSL1A2RUU4 121 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 PLNP26678 52 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 FOXI1Q12951 378 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
ATG4B-205ENST00000404914 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 H7C1H1 209 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 SPANXN1Q5VSR9 72 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 CFAP126Q5VTH2 177 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 CHD6Q8TD26 2715 aa11.86□□□□□ -0.51
ATG4B-205ENST00000404914 HOXA3O43365 443 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-205ENST00000404914 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 OR11H6Q8NGC7 330 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 SMIM2Q9BVW6 85 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 KMT2BQ9UMN6 2715 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-205ENST00000404914 IGHV7-81A0A0B4J1V7 117 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 CLEC3BP05452 202 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 DEFB1P60022 68 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 TMEM78Q5T7P6 136 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 NEXN-AS1Q8NBZ9 246 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 LINC01560Q8TB33 94 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 PRADC1Q9BSG0 188 aa11.85□□□□□ -0.51
ATG4B-205ENST00000404914 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
ATG4B-205ENST00000404914 KLRB1Q12918 225 aa11.84□□□□□ -0.51
ATG4B-205ENST00000404914 C15orf32Q32M92 178 aa11.84□□□□□ -0.51
ATG4B-205ENST00000404914 ZNF418Q8TF45 676 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-205ENST00000404914 SCGB3A1Q96QR1 104 aa11.84□□□□□ -0.51
ATG4B-205ENST00000404914 VKORC1Q9BQB6 163 aa11.84□□□□□ -0.51
ATG4B-205ENST00000404914 RASL10AQ92737 203 aa11.84□□□□□ -0.51
ATG4B-205ENST00000404914 ODF3BA8MYP8 253 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 B9A039 149 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 TSPAN13O95857 204 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 C1QTNF4Q9BXJ3 329 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 PSMB2P49721 201 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 EMP1P54849 157 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 CARD19Q96LW7 228 aa11.83□□□□□ -0.52
ATG4B-205ENST00000404914 TRAV12-1A0A0B4J245 112 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 LOC107984156A0A0G2JMH3 177 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 TGFAP01135 160 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 SLC25A16P16260 332 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
ATG4B-205ENST00000404914 CRYBA4P53673 196 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 XGP55808 180 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 ECSCRQ19T08 205 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 ARL17AQ8IVW1 177 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 BAALCQ8WXS3 180 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 BBC3Q96PG8 261 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-205ENST00000404914 SPTBN1Q01082 2364 aaKnown RBP11.82□□□□□ -0.52
ATG4B-205ENST00000404914 ZNF815PA8K554 130 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 M0R381 172 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 TCTEX1D4Q5JR98 221 aa11.82□□□□□ -0.52
ATG4B-205ENST00000404914 RBAKDNA6NC62 111 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 CLEC19AQ6UXS0 136 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 Q8N6K4 173 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 GEMIN7Q9H840 131 aaKnown RBP11.81□□□□□ -0.52
ATG4B-205ENST00000404914 CELSR1Q9NYQ6 3014 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms