RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SLC25A16P16260 332 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 FXYD2P54710 66 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 TAL2Q16559 108 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 PRR9Q5T870 116 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 SAMD5Q5TGI4 173 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 TMEM219Q86XT9 240 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 MEGF9Q9H1U4 602 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 IGF1P05019 195 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 COTL1Q14019 142 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 Q6ZQT7 251 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 CEND1Q8N111 149 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 ZFAND2AQ8N6M9 145 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 USMG5Q96IX5 58 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 DCHS2Q6V1P9 2916 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 LRBAP50851 2863 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 RELNP78509 3460 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 IGHV1-69DA0A0B4J2H0 117 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 TRBV7-9A0A0J9YWB2 115 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 H7C1H1 209 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 SOCS3O14543 225 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 IGHV1-69P01742 117 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 NAA38Q9BRA0 125 aaKnown RBP8.16□□□□□ -1.1
CLIP4-204ENST00000404424 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 DPH3P1Q9H4G8 78 aa8.16□□□□□ -1.1
CLIP4-204ENST00000404424 F8VRH5 84 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 S100A4P26447 101 aaKnown RBP8.15□□□□□ -1.1
CLIP4-204ENST00000404424 ASIPP42127 132 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 SUMO2P61956 95 aaKnown RBP8.15□□□□□ -1.1
CLIP4-204ENST00000404424 TM4SF20Q53R12 229 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 GPHB5Q86YW7 130 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 TOMM6Q96B49 74 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 M0R381 172 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 PPP1R17O96001 155 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 NEGR1Q7Z3B1 354 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 FAM19A4Q96LR4 140 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 LINC00527Q9UJ94 153 aa8.15□□□□□ -1.1
CLIP4-204ENST00000404424 UNQ9165/PRO28630Q6UXU0 137 aa8.14□□□□□ -1.11
CLIP4-204ENST00000404424 RASL10AQ92737 203 aa8.14□□□□□ -1.11
CLIP4-204ENST00000404424 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
CLIP4-204ENST00000404424 MED13LQ71F56 2210 aa8.14□□□□□ -1.11
CLIP4-204ENST00000404424 PHLDA1Q8WV24 401 aaPredicted RBP8.14□□□□□ -1.11
CLIP4-204ENST00000404424 LINC01619G3V211 115 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 G3V4G9 280 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 IGHG2P01859 326 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 HRNRQ86YZ3 2850 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-204ENST00000404424 CEP295Q9C0D2 2601 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 SAP30O75446 220 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 TRBV12-3P01733 135 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 IGHV4-39P01824 125 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 ANXA2RQ3ZCQ2 193 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 MAPKAPK5-AS1Q8N8E1 139 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 NEXN-AS1Q8NBZ9 246 aa8.13□□□□□ -1.11
CLIP4-204ENST00000404424 NHP2Q9NX24 153 aaKnown RBP8.13□□□□□ -1.11
CLIP4-204ENST00000404424 CHTOPQ9Y3Y2 248 aaKnown RBP8.13□□□□□ -1.11
CLIP4-204ENST00000404424 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
CLIP4-204ENST00000404424 J3KRW8 73 aa8.12□□□□□ -1.11
CLIP4-204ENST00000404424 CSTL1Q9H114 145 aa8.12□□□□□ -1.11
CLIP4-204ENST00000404424 C14orf178Q8N769 122 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-204ENST00000404424 POM121L12Q8N7R1 296 aa8.12□□□□□ -1.11
CLIP4-204ENST00000404424 SPOCK3Q9BQ16 436 aa8.12□□□□□ -1.11
CLIP4-204ENST00000404424 PIMREGQ9BSJ6 248 aa8.12□□□□□ -1.11
CLIP4-204ENST00000404424 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 OR11H12B2RN74 326 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 RNASE4P34096 147 aaKnown RBP8.11□□□□□ -1.11
CLIP4-204ENST00000404424 BRD3OSQ6XYD6 125 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 OR11H1Q8NG94 326 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 OR11H2Q8NH07 326 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 NBASA2RRP1 2371 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 E9PLD3 99 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
CLIP4-204ENST00000404424 C2orf66Q6UXQ4 117 aa8.11□□□□□ -1.11
CLIP4-204ENST00000404424 MYMXA0A1B0GTQ4 84 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 A6NDX4 124 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 K7ERJ3 54 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 NXPH4O95158 308 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 RNASE3P12724 160 aaKnown RBP8.1□□□□□ -1.11
CLIP4-204ENST00000404424 RPL32P62910 135 aaKnown RBP8.1□□□□□ -1.11
CLIP4-204ENST00000404424 SAMD13Q5VXD3 122 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 RPL39LQ96EH5 51 aaKnown RBP8.1□□□□□ -1.11
CLIP4-204ENST00000404424 HIST1H4GQ99525 98 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 CACNA1BQ00975 2339 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 IGLL5B9A064 214 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 RNF223E7ERA6 249 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 C19orf84I3L1E1 186 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 MGPP08493 103 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 C12orf74Q32Q52 190 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 KLK15Q9H2R5 256 aa8.1□□□□□ -1.11
CLIP4-204ENST00000404424 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
CLIP4-204ENST00000404424 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 TRBV7-3A0A075B6L6 115 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 IGHV4OR15-8A0A075B7B6 117 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 A0A087WW49 117 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 NDUFS8O00217 210 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 GNRH2O43555 120 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 IGHV3-11P01762 117 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms