RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NXT2Q9NPJ8 142 aaKnown RBP9.18□□□□□ -0.94
RBM39-206ENST00000403542 SETD2Q9BYW2 2564 aaPredicted RBP9.17□□□□□ -0.94
RBM39-206ENST00000403542 DPM2O94777 84 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 FABP2P12104 132 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 LY6EQ16553 131 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 ABCA2Q9BZC7 2435 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 MGPP08493 103 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 EMP1P54849 157 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 C11orf71Q6IPW1 123 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 UNQ9165/PRO28630Q6UXU0 137 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 C14orf178Q8N769 122 aaPredicted RBP9.17□□□□□ -0.94
RBM39-206ENST00000403542 FAM110DQ8TAY7 271 aaPredicted RBP9.17□□□□□ -0.94
RBM39-206ENST00000403542 MYOZ3Q8TDC0 251 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 RPL39LQ96EH5 51 aaKnown RBP9.17□□□□□ -0.94
RBM39-206ENST00000403542 C20orf173Q96LM9 149 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
RBM39-206ENST00000403542 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
RBM39-206ENST00000403542 IGHV7-4-1A0A0J9YVY3 117 aa9.16□□□□□ -0.94
RBM39-206ENST00000403542 SIRPDQ9H106 197 aa9.16□□□□□ -0.94
RBM39-206ENST00000403542 USP9XQ93008 2570 aaPredicted RBP9.16□□□□□ -0.94
RBM39-206ENST00000403542 TLN2Q9Y4G6 2542 aa9.16□□□□□ -0.94
RBM39-206ENST00000403542 S100A4P26447 101 aaKnown RBP9.16□□□□□ -0.94
RBM39-206ENST00000403542 LAGE3Q14657 143 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 Q8N8P6 123 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 DPF1Q92782 380 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 AJUBAQ96IF1 538 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 PSMG3-AS1Q96PY0 264 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 FAM208BQ5VWN6 2430 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 NRACQ8N912 160 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 CSTL1Q9H114 145 aa9.15□□□□□ -0.94
RBM39-206ENST00000403542 LY6DQ14210 128 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 CNFNQ9BYD5 112 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 ACACBO00763 2458 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 IGLV2-18A0A075B6J9 118 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 MINOS1Q5TGZ0 78 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 MINOS1-NBL1R4GNA1 71 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 TEX48A0A1B0GUV7 120 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 GNRH2O43555 120 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
RBM39-206ENST00000403542 ATP5G2Q06055 141 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 EBI3Q14213 229 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 HIST1H4GQ99525 98 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 SLC50A1Q9BRV3 221 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 NPFFR1Q9GZQ6 430 aa9.14□□□□□ -0.95
RBM39-206ENST00000403542 EDN2P20800 178 aa9.13□□□□□ -0.95
RBM39-206ENST00000403542 PKD1L2Q7Z442 2459 aa9.13□□□□□ -0.95
RBM39-206ENST00000403542 CENPVL3A0A0U1RRI6 287 aa9.13□□□□□ -0.95
RBM39-206ENST00000403542 H3BMG7 143 aa9.13□□□□□ -0.95
RBM39-206ENST00000403542 UBE2E1P51965 193 aa9.13□□□□□ -0.95
RBM39-206ENST00000403542 CYSLTR1Q9Y271 337 aa9.13□□□□□ -0.95
RBM39-206ENST00000403542 SIVA1O15304 175 aa9.12□□□□□ -0.95
RBM39-206ENST00000403542 FBXL19-AS1Q494R0 122 aa9.12□□□□□ -0.95
RBM39-206ENST00000403542 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
RBM39-206ENST00000403542 ARL3P36405 182 aa9.12□□□□□ -0.95
RBM39-206ENST00000403542 CEND1Q8N111 149 aa9.12□□□□□ -0.95
RBM39-206ENST00000403542 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
RBM39-206ENST00000403542 MXRA5Q9NR99 2828 aa9.12□□□□□ -0.95
RBM39-206ENST00000403542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.11□□□□□ -0.95
RBM39-206ENST00000403542 NPFFO15130 113 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 WFDC2Q14508 124 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 SH2D6Q7Z4S9 175 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 JPT2Q9H910 190 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 PHLDA3Q9Y5J5 127 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 G3V4G9 280 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 ATP5LO75964 103 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 Q6ZS46 218 aa9.11□□□□□ -0.95
RBM39-206ENST00000403542 TRAV41A0A0B4J266 112 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 NBL1P41271 181 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 SRSF1Q07955 248 aaKnown RBP eCLIP9.1□□□□□ -0.953e-28■■■□□ 14.6
RBM39-206ENST00000403542 ANXA2RQ3ZCQ2 193 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 C5orf56Q8N8D9 126 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 OOSP1A8MZH6 123 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 SCGB2A2Q13296 93 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 C1orf122Q6ZSJ8 110 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 ABCA12Q86UK0 2595 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 LMO4P61968 165 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
RBM39-206ENST00000403542 C2CD3Q4AC94 2353 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 LRRK2Q5S007 2527 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 A0A087WX48 190 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 PF4V1P10720 104 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 KLRB1Q12918 225 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 KLHL30-AS1Q8NEE0 82 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 RASL10AQ92737 203 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 ZNF479Q96JC4 524 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 GTSF1LQ9H1H1 148 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 A0A087WWL8 130 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 RBAKDNA6NC62 111 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 C19orf84I3L1E1 186 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 RAB9AP51151 201 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 SUMO2P61956 95 aaKnown RBP9.09□□□□□ -0.95
RBM39-206ENST00000403542 BLCAPP62952 87 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 ETDBQ3ZM63 59 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms