RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 LOXL1Q08397 574 aaPredicted RBP7.72□□□□□ -1.17
HERC3-202ENST00000402738 ODF3L1Q8IXM7 274 aa7.72□□□□□ -1.17
HERC3-202ENST00000402738 UBE2E2Q96LR5 201 aa7.72□□□□□ -1.17
HERC3-202ENST00000402738 NXPH4O95158 308 aa7.72□□□□□ -1.17
HERC3-202ENST00000402738 EML6Q6ZMW3 1958 aa7.72□□□□□ -1.17
HERC3-202ENST00000402738 TRAV12-2A0A075B6T6 113 aa7.71□□□□□ -1.17
HERC3-202ENST00000402738 ATP6V0E1O15342 81 aa7.71□□□□□ -1.17
HERC3-202ENST00000402738 GDF5OSQ5U4N7 250 aa7.71□□□□□ -1.17
HERC3-202ENST00000402738 AGPAT4-IT1Q9H0P7 198 aa7.71□□□□□ -1.17
HERC3-202ENST00000402738 DAZ1Q9NQZ3 744 aaKnown RBP7.71□□□□□ -1.17
HERC3-202ENST00000402738 LY6HO94772 140 aa7.71□□□□□ -1.18
HERC3-202ENST00000402738 MDS2Q8NDY4 140 aa7.71□□□□□ -1.18
HERC3-202ENST00000402738 WDR81Q562E7 1941 aa7.71□□□□□ -1.18
HERC3-202ENST00000402738 G3V318 75 aa7.71□□□□□ -1.18
HERC3-202ENST00000402738 PF4P02776 101 aa7.71□□□□□ -1.18
HERC3-202ENST00000402738 COL8A2P25067 703 aa7.71□□□□□ -1.18
HERC3-202ENST00000402738 LTBP1Q14766 1721 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 TRBV10-2A0A0K0K1G8 114 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 FAM223BA6NKX1 122 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 TCL1BO95988 128 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 BRD3OSQ6XYD6 125 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 FAM223AQ8IWN6 122 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 RNF114Q9Y508 228 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 GTF3C1Q12789 2109 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 CACNA1BQ00975 2339 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 RBAKDNA6NC62 111 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 GNRH2O43555 120 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 FAM110DQ8TAY7 271 aaPredicted RBP7.7□□□□□ -1.18
HERC3-202ENST00000402738 HOXD3P31249 432 aaPredicted RBP7.7□□□□□ -1.18
HERC3-202ENST00000402738 PRSS22Q9GZN4 317 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 USF3Q68DE3 2245 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 ZGRF1Q86YA3 2104 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 DYSFO75923 2080 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 IGHV1OR15-1A0A075B7D0 117 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 CLEC2BQ92478 149 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 Q9H8V8 135 aa7.7□□□□□ -1.18
HERC3-202ENST00000402738 RLFQ13129 1914 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 E9PLD3 99 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 C11orf44Q8N8P7 122 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 NBASA2RRP1 2371 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 IGKV1OR2-108A0A075B7D4 117 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 USMG5Q96IX5 58 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 MED13LQ71F56 2210 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 A0A0J9YXV3 536 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 H3BUX3 64 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 ZNF883P0CG24 379 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 SS18Q15532 418 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 DSCR8Q96T75 97 aa7.69□□□□□ -1.18
HERC3-202ENST00000402738 RPL32P62910 135 aaKnown RBP7.69□□□□□ -1.18
HERC3-202ENST00000402738 A0A1B0GXF2 115 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 RHODO00212 210 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 NDUFC2O95298 119 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 IGLV2-14P01704 120 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 LOXP28300 417 aaPredicted RBP7.68□□□□□ -1.18
HERC3-202ENST00000402738 ZNRF2Q8NHG8 242 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.68□□□□□ -1.18
HERC3-202ENST00000402738 IGHG3P01860 377 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 GATA4P43694 442 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 DEFB131AP59861 70 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 SUMO4Q6EEV6 95 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 LINC00311Q8N616 119 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 IGHV1-69DA0A0B4J2H0 117 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 CRYGBP07316 175 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 NDUFA11Q86Y39 141 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 Q8N1Y9 231 aa7.68□□□□□ -1.18
HERC3-202ENST00000402738 TRAV25A0A0B4J276 109 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 IGLV2-8P01709 118 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 UCNP55089 124 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 ZFP2Q6ZN57 461 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 DAND5Q8N907 189 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 F6UB75 175 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 SAA4P35542 130 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 HERVK_113P63121 156 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 C5orf47Q569G3 176 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 PLXNA2O75051 1894 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 DSCAML1Q8TD84 2053 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 RHOHQ15669 191 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 C11orf53Q8IXP5 236 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 ORMDL1Q9P0S3 153 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 H3BT86 120 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 RPL39P62891 51 aaKnown RBP7.67□□□□□ -1.18
HERC3-202ENST00000402738 Q6ZSR3 168 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 ZNF295-AS1Q8N0V1 137 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 PIP4P2Q8N4L2 257 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 Q8TCH9 128 aa7.67□□□□□ -1.18
HERC3-202ENST00000402738 MBD3L4A6NDZ8 208 aaPredicted RBP7.66□□□□□ -1.18
HERC3-202ENST00000402738 MBD3L3A6NE82 208 aaPredicted RBP7.66□□□□□ -1.18
HERC3-202ENST00000402738 MBD3L5A6NJ08 208 aaPredicted RBP7.66□□□□□ -1.18
HERC3-202ENST00000402738 C11orf86A6NJI1 115 aa7.66□□□□□ -1.18
HERC3-202ENST00000402738 CRYGCP07315 174 aa7.66□□□□□ -1.18
HERC3-202ENST00000402738 MBD3L2Q8NHZ7 208 aaPredicted RBP7.66□□□□□ -1.18
HERC3-202ENST00000402738 ZNF503Q96F45 646 aa7.66□□□□□ -1.18
HERC3-202ENST00000402738 NLRC5Q86WI3 1866 aa7.66□□□□□ -1.18
HERC3-202ENST00000402738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.66□□□□□ -1.18
HERC3-202ENST00000402738 IGKV2-29A2NJV5 120 aaPredicted RBP7.66□□□□□ -1.18
HERC3-202ENST00000402738 C19orf71A6NCJ1 209 aa7.66□□□□□ -1.18
HERC3-202ENST00000402738 LGALS9O00182 355 aa7.66□□□□□ -1.18
HERC3-202ENST00000402738 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
HERC3-202ENST00000402738 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 236.5 ms