RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
SCAF4-202ENST00000399804 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
SCAF4-202ENST00000399804 TRGV2A0A075B6R0 118 aa10.81□□□□□ -0.68
SCAF4-202ENST00000399804 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
SCAF4-202ENST00000399804 IGF1P05019 195 aa10.81□□□□□ -0.68
SCAF4-202ENST00000399804 KLK9Q9UKQ9 250 aa10.81□□□□□ -0.68
SCAF4-202ENST00000399804 TNFRSF6BO95407 300 aa10.81□□□□□ -0.68
SCAF4-202ENST00000399804 SLURP1P55000 103 aa10.81□□□□□ -0.68
SCAF4-202ENST00000399804 KNCNA6PVL3 124 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 SPRY2O43597 315 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 AVPP01185 164 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 KRTAP10-9P60411 292 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 PAX2Q02962 417 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 AMMECR1LQ6DCA0 310 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 C12orf54Q6X4T0 127 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 LINC00322Q6ZN03 302 aaPredicted RBP10.8□□□□□ -0.68
SCAF4-202ENST00000399804 OR2K2Q8NGT1 345 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 MRPL53Q96EL3 112 aaKnown RBP10.8□□□□□ -0.68
SCAF4-202ENST00000399804 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
SCAF4-202ENST00000399804 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
SCAF4-202ENST00000399804 ZNF876PQ49A33 203 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 ORMDL2Q53FV1 153 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 Q6ZVH6 145 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 ATP6V0BQ99437 205 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 FLNBO75369 2602 aaKnown RBP10.79□□□□□ -0.68
SCAF4-202ENST00000399804 IGHV4OR15-8A0A075B7B6 117 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 A0A087WW49 117 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 TMEM170BQ5T4T1 132 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 WIPF2Q8TF74 440 aaPredicted RBP10.79□□□□□ -0.68
SCAF4-202ENST00000399804 TET2Q6N021 2002 aaPredicted RBP10.79□□□□□ -0.68
SCAF4-202ENST00000399804 CDKN1BP46527 198 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 LAGE3Q14657 143 aa10.79□□□□□ -0.68
SCAF4-202ENST00000399804 LRRC75A-AS1Q8N1F1 130 aa10.78□□□□□ -0.68
SCAF4-202ENST00000399804 OR11H2Q8NH07 326 aa10.78□□□□□ -0.68
SCAF4-202ENST00000399804 GCSHP23434 173 aa10.78□□□□□ -0.68
SCAF4-202ENST00000399804 TMEM158Q8WZ71 300 aa10.78□□□□□ -0.68
SCAF4-202ENST00000399804 CYSLTR1Q9Y271 337 aa10.78□□□□□ -0.68
SCAF4-202ENST00000399804 TRAV26-2A0A0B4J265 109 aa10.77□□□□□ -0.68
SCAF4-202ENST00000399804 A6NDN8 102 aa10.77□□□□□ -0.68
SCAF4-202ENST00000399804 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.68
SCAF4-202ENST00000399804 BOD1L1Q8NFC6 3051 aa10.77□□□□□ -0.68
SCAF4-202ENST00000399804 GNRH2O43555 120 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 Q6ZS46 218 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 OR4C5Q8NGB2 326 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 GPHB5Q86YW7 130 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 MLST8Q9BVC4 326 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 LENEPQ9Y5L5 61 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 hDV102S1A0JD36 115 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 C19orf71A6NCJ1 209 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 NPYP01303 97 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 ARL6IP6Q8N6S5 226 aa10.77□□□□□ -0.69
SCAF4-202ENST00000399804 IGHG4P01861 327 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 Q1RN00 199 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 C10orf99Q6UWK7 81 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 CSTL1Q9H114 145 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 UBE2L6O14933 153 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 IGHV1OR15-1A0A075B7D0 117 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 KIR2DL5BA0A0G2JN68 375 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 KIR2DL5BA0A0G2JPC4 375 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 KIR2DL5AQ8N109 375 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 ZFAND3Q9H8U3 227 aa10.76□□□□□ -0.69
SCAF4-202ENST00000399804 CCL24O00175 119 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 INSP01308 110 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 SIGLEC8Q9NYZ4 499 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 COL27A1Q8IZC6 1860 aaPredicted RBP10.75□□□□□ -0.69
SCAF4-202ENST00000399804 TRGV1A0A0A0MS02 117 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 IGKV3OR2-268A0A0C4DH90 116 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 K7EMT4 169 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 CMC4P56277 68 aaPredicted RBP10.75□□□□□ -0.69
SCAF4-202ENST00000399804 ZNF415Q09FC8 603 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 MYCNOSP40205 109 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 RNF114Q9Y508 228 aa10.75□□□□□ -0.69
SCAF4-202ENST00000399804 Q6YL49 198 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 IGHV1-24A0A0C4DH33 117 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 DPM2O94777 84 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 MRGPRG-AS1Q2M3A8 158 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 MAJINQ3KP22 176 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 C2orf70A6NJV1 201 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 SCGB1C2P0DMR2 95 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 HIST1H4GQ99525 98 aa10.74□□□□□ -0.69
SCAF4-202ENST00000399804 GEMIN7Q9H840 131 aaKnown RBP10.74□□□□□ -0.69
SCAF4-202ENST00000399804 A0A087X0K7 114 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 RAB37Q96AX2 223 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 VCYO14598 125 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 ZNF80P51504 273 aaPredicted RBP10.73□□□□□ -0.69
SCAF4-202ENST00000399804 SMAGPQ0VAQ4 97 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 OR9G4Q8NGQ1 327 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 MAP1AP78559 2803 aaPredicted RBP10.73□□□□□ -0.69
SCAF4-202ENST00000399804 TMEM89A2RUT3 159 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 VWC2LB2RUY7 222 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 C20orf144Q9BQM9 153 aa10.73□□□□□ -0.69
SCAF4-202ENST00000399804 VCX2Q9H322 139 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms